Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2111 ATGAATACAGATTCGGCAACAATGGAGGCGCAGCAGAGAGAAGTGGATCGGGTTAAGGGACCATGGAGTCCGGAGGAGGATGAGTTGTTGCACAAGCTCGTGCAACGCTACGGTCCTAGGAATTGGTCCACAATAAGCAAATCAATACCCGGTAGGTCCGGGAAGTCTTGTCGTCTGCGGTGGTGCAACCAGCTTTCGCCGGACGTGGAGCACCGGTCCTTCACACAGGAAGAAGACGAGATCATCGTCAAAGCCCACTCAAAGTTCGGCAACAAATGGGCCACCATAGCGAGGCTCCTGAACGGCCGTACGGACAACGCGATTAAAAACCACTGGAACTCGACCTTGAAGCGCAAGTACTCTTCGTTGGTCGACGGAGAAGGCACAGCAAACGACGGGCCTCCGGAAAAGAAACCGCTCATCGCAGAACGCGTTGTGCCGATACAGTCATTACCGCCTGGCGCCCTTTGTTACAGCCCAAGCAGTCCATCAGGATCTGATGTTAGTGATTCTGGTCTTCCTTTGGCTTCATCTTCAATGGCGATTGGGCCTGTAGCGAGAAAATGCCCGAGTCCAATCTTCAACTTAAACAAAGAGCCCTGCACTGATCTTAGTCTGTACACTCTGGGACCCGATTTGAAGGAGTCGCATAACTTACCGGTTCCGAGTCCTCCTGGTTTTAGTGCCAAGGCACAAACGCAGTCTGAGAAGTTGTCATCAATAGCTACATTTGGGCCTGATTTACTGATGGTGATGAAGGAAATGATAAGGGAAGAAGTGAGAAATTACATGGAGGGAAATAATGATAGATTGTGCTCTAATCCTGACGATGTGAGTGCTGGAATTTCAAAGTTAAATTGA 861 0.4994 MNTDSATMEAQQREVDRVKGPWSPEEDELLHKLVQRYGPRNWSTISKSIPGRSGKSCRLRWCNQLSPDVEHRSFTQEEDEIIVKAHSKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSLVDGEGTANDGPPEKKPLIAERVVPIQSLPPGALCYSPSSPSGSDVSDSGLPLASSSMAIGPVARKCPSPIFNLNKEPCTDLSLYTLGPDLKESHNLPVPSPPGFSAKAQTQSEKLSSIATFGPDLLMVMKEMIREEVRNYMEGNNDRLCSNPDDVSAGISKLN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2111 286 CDD SANT 73 116 IPR001005 -
Acco03g2111 286 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Acco03g2111 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Acco03g2111 286 MobiDBLite consensus disorder prediction 1 22 - -
Acco03g2111 286 FunFam Transcription factor MYB44 73 119 - -
Acco03g2111 286 Gene3D - 73 119 - -
Acco03g2111 286 FunFam MYB transcription factor 19 70 - -
Acco03g2111 286 Gene3D - 18 70 - -
Acco03g2111 286 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
Acco03g2111 286 SMART sant 70 118 IPR001005 -
Acco03g2111 286 SMART sant 18 67 IPR001005 -
Acco03g2111 286 PANTHER MYB PROTEIN-RELATED 19 211 - -
Acco03g2111 286 CDD SANT 21 63 IPR001005 -
Acco03g2111 286 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Acco03g2111 286 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Acco03g2111 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Acco03g2111 286 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Acco03g2111 286 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2111 Acco-ChrAcco03 47187897 47188757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2111 10 264 MYB Transcription Factor Family AT2G23290 49.819 3.73e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco03g2111 Myb_DNA-binding 2.2e-17 CL0123