Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2102 ATGGACGACGACCACGACCACGACGATTTCCACCGGGACCACCTTCTGACCCCAGCTTCCTCTACTTTCTCCCACCTTCTTTTTGGCCATGACCATGTGGACCCCACTCTTCACTCTTCGTCTCTTTTCTCCATTGGGAATAATGGCACCTCCCCCAAAATGCTCTGTTTCGAGGGCTATATCCCAAACAATCAATCCGACCTCTTTGTTTCTGAAACCAACGCCGTTACTGTAGTTACCCCTCAGAAGTCCGTCATCACTTCCAGCGAATCCTCTTCTGCTTCTTCCTCCGGCAACCATTACTCTAACTCTAATAAAAAGCGAAGGTCGGGCCAGCAACTGGCGGGCTGCTCGGAATCCCTCGTCACGGCGGCTGGAAGTTGTAGCCGGAGGAATTTGAAGAAGGCCAAAGCACAGAACACCACTTCAACAGGACATGCAAAGAGGAAGGAGAAACTTGGGGAACGAATCGCAGCGTTACAACAACTGGTTTCTCCATTTGGGAAGACAGATACAGCTTCTGTGCTTCACGAGGCAATGGGATACATAAGGTTTCTCCATGATCAAGTTCAGGTCCTCTGCTCGCCTTACTTGCAGGCACCTCCTTCTTCACCTCACTCCCACTGCAATACGGGGGGTGGAGAAGAAGAAGCCAAAGGAGAATTGAGCAGAAGAGGACTGTGTCTGATCCCTGTGGAATCCACCCTACACGTGGCCAGCAGCAACGGTGCTGATTTCTGGTCACCTGCCATGGCCAATAATGCCTCCTCGTCAGCAAGACTCTGA 786 0.5153 MDDDHDHDDFHRDHLLTPASSTFSHLLFGHDHVDPTLHSSSLFSIGNNGTSPKMLCFEGYIPNNQSDLFVSETNAVTVVTPQKSVITSSESSSASSSGNHYSNSNKKRRSGQQLAGCSESLVTAAGSCSRRNLKKAKAQNTTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQAPPSSPHSHCNTGGGEEEAKGELSRRGLCLIPVESTLHVASSNGADFWSPAMANNASSSARL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2102 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 201 IPR036638 GO:0046983
Acco03g2102 261 Gene3D - 134 199 IPR036638 GO:0046983
Acco03g2102 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Acco03g2102 261 MobiDBLite consensus disorder prediction 133 152 - -
Acco03g2102 261 FunFam Transcription factor bHLH113 130 200 - -
Acco03g2102 261 CDD bHLH_AtbHLH_like 148 193 IPR045239 -
Acco03g2102 261 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 238 - -
Acco03g2102 261 MobiDBLite consensus disorder prediction 84 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2102 Acco-ChrAcco03 47074928 47077278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2102 148 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.282 1.89e-36 125