Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2076 ATGGAGCCTAGTGAGATAATTATCTCTGAAGAATGGAGTTCCCTTAGTGGGTTAGCAGAGTTCATGACCCAGTTTTATGAAAACTGTTCAGTCCCAGGGGATTTGTATGGAAATCCCAACTTGTTGGGATTTCCATCTTCTTCTGCATTTTGGCCTACACACTTCACTGGTGATGACAGCTTCTATTTTCCTTCAAATTTTGCTCATGATCCTACTAATAACAACTTTGGTTTCACATCTATGTGTTGTGAAGTTCAAGTTTCTGAACCAGCACAAGATGATGATCATAAAACCAGCAACCTGGAAAGAAAGAGATCATTGAGTTCAGTTGAGATACAGAAGAACAAGAGGAATGTTAAACCCAGGAGGAATAAGAATCCAACGTGTTCTAAAAGAAACAAGGAAGAAGAAAGAAGCGATAATGATGATGACAGTCTTAACTCTAGCAGATTCTGCTCATCATCAGAAGATGATTCCATTGTTGCTTCTTCTCATCAGGAAGATGACACAAGCCCTAAAAACAATACAGATCTCAAGTCAAATCTCAAATCAAGATCTGATACAGGTCCTTCCACTGAGGCACAGAGCCTCTATGCAAGGAGACGAAGACTGAGAATAAATGAAAGGTTGAGAATCTTGCAAAACCTTGTCCCAAGTGGAACAAAGGTGGATATAAGCACTATACTTGAGGAAGCTGTCCAATATGTGAAATTTTTACAGCTACAAATTAAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCAATTGCTTTCAATGGATTGAATATTGGATTAACAAGACAACCATGA 813 0.3911 MEPSEIIISEEWSSLSGLAEFMTQFYENCSVPGDLYGNPNLLGFPSSSAFWPTHFTGDDSFYFPSNFAHDPTNNNFGFTSMCCEVQVSEPAQDDDHKTSNLERKRSLSSVEIQKNKRNVKPRRNKNPTCSKRNKEEERSDNDDDSLNSSRFCSSSEDDSIVASSHQEDDTSPKNNTDLKSNLKSRSDTGPSTEAQSLYARRRRLRINERLRILQNLVPSGTKVDISTILEEAVQYVKFLQLQIKLLSSDDLWMYAPIAFNGLNIGLTRQP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2076 270 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 72 248 IPR045843 GO:0003700|GO:0006355
Acco03g2076 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 256 IPR036638 GO:0046983
Acco03g2076 270 MobiDBLite consensus disorder prediction 89 199 - -
Acco03g2076 270 Pfam Helix-loop-helix DNA-binding domain 200 240 IPR011598 GO:0046983
Acco03g2076 270 FunFam Basic helix-loop-helix transcription factor 191 248 - -
Acco03g2076 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Acco03g2076 270 MobiDBLite consensus disorder prediction 128 145 - -
Acco03g2076 270 MobiDBLite consensus disorder prediction 146 195 - -
Acco03g2076 270 MobiDBLite consensus disorder prediction 89 117 - -
Acco03g2076 270 SMART finulus 196 245 IPR011598 GO:0046983
Acco03g2076 270 Gene3D - 191 253 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2076 Acco-ChrAcco03 46822308 46824132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2076 148 267 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 63.934 2.32e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco03g2076 HLH 3.5e-09 No_clan