Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2055 ATGTCTCGCTCGTCGACCGACGCTTTTGCCGCCGGTGACTTGCTATGCGGCGAGGATGCCGATGAAGTGATCTACGGCGAAAACCACCCGATGCCGTCGTCGTTGTGTCTTCCGTCGTATTCACCGCCGTCCGACGACGCAACCATCGGCAGACTCATCGACCTCGAGGCACATCACATGCCCGACCCAGATTATTTACGGCGGTGCCGTTATCGTTTAATCGACGTAACCGCTCGCCAAGACTCGATCAACTGGATCTTGAAGGTTCACGCACATTACAAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTTTCTTGCTCTCCACTTCCGGTAACCTCTTATCGCGTTTCTCCTATCCAAGAAAATCGAGGTTCTTTCCGGCAAATATCAGATTTCCCGCGAAAATTTCTGACGCGATTTCTTGTTTATTCGCAGCGGCAAATCCAATGGGAGTATCATCTGATATCAGTGGCATGCTTATCTTTAGCGGCAAAAATGGAGGAACCTGAAGTGCCTCTGTTACCGGACCTTCAATTAGTGGATCCAAGATTTGTATTCGAACCCAAGACGATTCAAAGAATGGAGCTCTGTGTCATGACCAAGCTACGCTGGAGATTACGCTCCATAACGCCTTTTGATTATCTCCATTACTTCATCTCTAAGCTCTCTTGCTCCTCCGACCGGCAACCCGAATCCATAACCCGGTTCATCTCGACTGCTTCCAATCTCATCCTCAGCACTACCCTTGGTACCACCATATCCCTGTTTCAACTCAACGTGATGGATTTCTTGGGTTTTGCGCCGTCGACCTTAGCCGCCGCCGCCGTTCTCTGCTCCGTTGGCAAGGTCCAACCACCACCGTCCTTTCATGAGGGAGTAATCAAAGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGATTACGTGGTGGACACGTGTCCCTTCGAGCCGGAGCCGCCTTCGAGTCCCGTAGGCGTGCTCGACGCCGCTAGTTCATGTGGCAGCTGCGAAACTCGCTCTGAGCAGCCAGCGTCAACCAGCGAAGCCGAGCCGCCCAACAATCGGGCTCGATCCCTTGATCCTAATGGGTCATAG 1116 0.5215 MSRSSTDAFAAGDLLCGEDADEVIYGENHPMPSSLCLPSYSPPSDDATIGRLIDLEAHHMPDPDYLRRCRYRLIDVTARQDSINWILKVHAHYKFRPVTAFLSVNYLDRFLSCSPLPVTSYRVSPIQENRGSFRQISDFPRKFLTRFLVYSQRQIQWEYHLISVACLSLAAKMEEPEVPLLPDLQLVDPRFVFEPKTIQRMELCVMTKLRWRLRSITPFDYLHYFISKLSCSSDRQPESITRFISTASNLILSTTLGTTISLFQLNVMDFLGFAPSTLAAAAVLCSVGKVQPPPSFHEGVIKEMVRSCHQLMEDYVVDTCPFEPEPPSSPVGVLDAASSCGSCETRSEQPASTSEAEPPNNRARSLDPNGS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2055 371 MobiDBLite consensus disorder prediction 341 371 - -
Acco03g2055 371 SUPERFAMILY Cyclin-like 45 117 IPR036915 -
Acco03g2055 371 CDD CYCLIN_AtCycD-like_rpt1 78 211 - -
Acco03g2055 371 SUPERFAMILY Cyclin-like 143 213 IPR036915 -
Acco03g2055 371 SMART Cyclin_C_2 216 344 IPR004367 -
Acco03g2055 371 Pfam Cyclin, N-terminal domain 52 116 IPR006671 -
Acco03g2055 371 Pfam Cyclin, N-terminal domain 143 213 IPR006671 -
Acco03g2055 371 PANTHER CYCLINS 56 316 IPR039361 -
Acco03g2055 371 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Acco03g2055 371 CDD CYCLIN_AtCycD-like_rpt2 216 312 - -
Acco03g2055 371 Gene3D - 62 117 - -
Acco03g2055 371 Gene3D - 143 214 - -
Acco03g2055 371 Gene3D - 215 292 - -
Acco03g2055 371 Gene3D - 51 61 - -
Acco03g2055 371 SMART cyclin_7 84 207 IPR013763 -
Acco03g2055 371 Pfam Cyclin, C-terminal domain 216 316 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2055 Acco-ChrAcco03 46672158 46674080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2055 13 319 Core Cell Cycle Gene Families AT1G70210 37.224 3.08e-57 188