Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2048 ATGAGGTTCTTCATCTTGATCGTCTTCCTCCTTCTGGTGGTCCCTTCCAACACTGCAATATCTTCTCAAGTGGTTGAGACCCTTCCTGGCTATCCTGGAAAACTTCCTTTCACGCTTGAAACTGGGTATGTGGGAGTAGGTGACTCAGAGAGCGTTCAGCTGTTTTACTACTTCACTGAATCTGAGCGAGATCCTGATGAAGATCCTCTCGTGCTCTGGCTCACCGGTGGTCCTGGTTGCACTGCTTTCTCTGGCCTCGTCTTTGAAGTTGGTCCTCTTTCATTTGATTATGCCAAGTCTAGTGATGGCAAAGTGAAAGTTCCTGTGCTCAAGTTAAATCCCTACTCATGGACTAAGGTATCCAATATGATATTCATTGATGCTCCCGTTGGCACCGGGTTTTCCTACGCAACAAAATCGGAGGCATATGCAGTCAATGATACATTGTCCGCCACACAAACCTATGAATTTCTGAGGAAGTGGCTGTTGTCTCATCCACGGTTCCTAAAACATCCTTTGTACATCTCTGGTGATTCATATTCAGGCATCATTATCCCTATCCTTGTCAAGAAGATCTCTGACGATAATGACGCAGGTGTCAAGCCACGATTGAATCTAAAGGGTTATTCGATTGGAAATCCAGTTACAGATGAAGTTGTTGATAAGAACGAGAGAGTTACCTTTGCACACAGAATAGGACTAATACCAGATAATCTTTATAAGTCAACCAAAAGGGATTGCCATGGTGAATATGTGGAAGTTGATCCAAGGAATGCTGCATGTTTAGGGGATCTTGAAGTTTACACTGAGTGCATCAAGATGATATGTCTCGCAAACGTATTAGAGCCTGACTGTGCTTTGGACTCACCAAAACCTGAATCACTCAAATGGGATTCTAATATTGTCAAGGAGAATTTCTTGGAGCTTCTTTCTACCCTTGGGCACTCTGGACGACCATGGTGTCGGTCGTACAACTATGTCTTTTCTTACGTTTGGGCCAATGACCCAGAAGTTCAGGCTGCCCTCCACGTTCGGAAGGGAACTGTGGGGGAGTGGCAGAGATGCAATAGGAGTTTAGCTTACACAAAGGATGTATCGTGTAGTGTCCCATTCCACAAATTCCTTACAAGCAAACCCTTCAAAGTACTGATTTACAGTGGGGACCATGACATGGCTATCCCATACGTGGGTACCATTACATGGGTGAAGTCTCTTAACTTGACAGAGAGAAGAAGGTGGAGACCATGGTATGTCCAAGGCCAAGTTGCAGGATATGCTATGGAGTTCACAAACAACAACTACAGCTTAACATATGCGACAGTGAAGGGAGCAGGACATACAGCACCAGAGTACAATCCCATGCAATGCTTGGCTATGTTTTCTAGGTGGCTTGCCCGTGAACCTTTATAA 1410 0.4482 MRFFILIVFLLLVVPSNTAISSQVVETLPGYPGKLPFTLETGYVGVGDSESVQLFYYFTESERDPDEDPLVLWLTGGPGCTAFSGLVFEVGPLSFDYAKSSDGKVKVPVLKLNPYSWTKVSNMIFIDAPVGTGFSYATKSEAYAVNDTLSATQTYEFLRKWLLSHPRFLKHPLYISGDSYSGIIIPILVKKISDDNDAGVKPRLNLKGYSIGNPVTDEVVDKNERVTFAHRIGLIPDNLYKSTKRDCHGEYVEVDPRNAACLGDLEVYTECIKMICLANVLEPDCALDSPKPESLKWDSNIVKENFLELLSTLGHSGRPWCRSYNYVFSYVWANDPEVQAALHVRKGTVGEWQRCNRSLAYTKDVSCSVPFHKFLTSKPFKVLIYSGDHDMAIPYVGTITWVKSLNLTERRRWRPWYVQGQVAGYAMEFTNNNYSLTYATVKGAGHTAPEYNPMQCLAMFSRWLAREPL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2048 469 FunFam Serine carboxypeptidase-like 19 18 291 - -
Acco03g2048 469 Pfam Serine carboxypeptidase 29 465 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 SUPERFAMILY alpha/beta-Hydrolases 25 468 IPR029058 -
Acco03g2048 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Acco03g2048 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 453 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Acco03g2048 469 Gene3D alpha/beta hydrolase 18 468 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2048 Acco-ChrAcco03 46600974 46606603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2048 332 469 Calmodulin-binding Proteins AT2G22960 46.377 4.50e-43 149