Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2033 ATGCCTGGGGTTTCTCTTAGAATGCTTTTTTTTCTGTGTCTCCTTCCCATATTCATATCTCAAATCACTGCACAGCCTCAGTTCCTGTTTAATGACTGTAACGGGGCTAATGGCAACTACACTGCTAATAGGGCTTACCGGACCAACCTCGATACCCTTTTGTCCAATATTGCTTCCAACACAGAAATTGACTATGGCTTCTATAACTTCTCTTTTGGCCAAAACTCTGACAAGCTTAATGCTATAGGATTGTGCAGAGGAGATGTTGCCCCAGATTTATGCCGTAGTTGCCTCAGTGATTCCAGAACCCAACTCACCCAGCTGTGTCCAAATCAGATGGAGGCAATTGGGTTCTATGACAACTGCATGTTACGCTATTCAAACCGTTCAATATTTAACACCGTCGAAAATTCGCCTTCACAGTGCATGTGGGACGATACTAATGCAACAGATGTGGATCAGTTCAATGGAGCGCTGAGGAATTTGCTGGATGGTTTAAGTAGCAGGGCTTCATCAGGGAACTCTCTTCGCAAGTTTGCGACAGGAAGTGCTCAAGGTCCAAACTTTCAGACTCTATTTGGTCTCGTGCAGTGTACACCTGATTTATCTTCGGTTCAGTGTAGTGACTGCTTGGTTAAGGCAATCTCAGATCTCCCAGGATGTTTTGGTGGCAAGATTGGTGGTAGAATTTTAAGACCAAGCTGTAATTTTAGATATGAAATCTATCGCTTCTACAACGCTACTGATGATTCAACGCCACCATCAGAAGGAAAGAGCAACACATCACGAACTATAATTGCCATAGTTGTGCCAATTGCTTCCGTTCTTGTCTTGTTCATCCTTGTCTGCATCTGTTTAAGAATGAGGAAATCGTGGAAACATATTGAAAATGACGACGATGAGGCTGATAATGAAATTAAGTCATCTGAGACATTGCAAATGAAGTATGACACCATCATAGCTGCCACAAATAACTTTTCTGAAGCAAATAAGCTTGGACAGGGCGGGTTTGGACCTGTTTATAAGGGCAAGCTTACTGATGGACAAGAAATTGCCGTAAAAAGGTTGTCTGGGAATTCATCCCAAGGGGATACAGAATTTAAGAATGAAGTGCTGTTAGTAGCCAAGCTTCAGCATCGAAATCTAGTAAGGCTACTTGGTTTTTGTTTGGAAAGGCAAGAAAGACTACTAGTCTATGAGTTTATTCCCCACAAAAGTCTTGATTACTTCATATTTGATCCAATCAAGCGTGCACAGTTATCTTGGGAAGAGCGATACAAAATCATAGGAGGCATCGCTAGAGGACTTCTTTACCTTCATGAAGATTCTCGATTGCGAATTATTCATCGTGATCTTAAAGCAAGCAACATTCTTTTAAATGCGGAGATGAGTGCAAAAATATCAGATTTTGGCATGGCAAGATTAGTTGAAAGGGACCAAACTCAAGACAATACGAGCAGAGTCGTTGGGACATTTGGATATATGGCACCTGAATATGTATTGCATGGACAATTTTCTGTGAAGACGGATGTTTTTAGTTTTGGTGTACTAGTTCTGGAGATTGTAACTGGTCGTAAAAATAGCGAGGTTTTTCATGGGGAGAATCCAGAGAATCTAGTCAGCTATGCATGGAGAAACTGGAGGGAAGGAACAGCTACAAGAATAGTGGACCCCGAGATTAGGGAAGGTTCAAGAGATGAAATAATGAGATGCATCCACATAGGATTGCTGTGTGTTCAAGATGATGTAGCTGACAGACCAAGCATGGCTTCAGTTGAAGTCATGCTTAACAGCTACTCTGCCACCTTTCCCTTGCCTTCTCAACCTGCTTCCTACATGAATAGTAGTAGAAACTGGTCAGGAGAGTATACTTCAGGGGCAACAAGATCAAATGAACTTAAAAATCAATCTGTTAAAGCATTGTCGAATAATGCATCGATGTTTCATCCATTTCCTCGTTAG 1962 0.4164 MPGVSLRMLFFLCLLPIFISQITAQPQFLFNDCNGANGNYTANRAYRTNLDTLLSNIASNTEIDYGFYNFSFGQNSDKLNAIGLCRGDVAPDLCRSCLSDSRTQLTQLCPNQMEAIGFYDNCMLRYSNRSIFNTVENSPSQCMWDDTNATDVDQFNGALRNLLDGLSSRASSGNSLRKFATGSAQGPNFQTLFGLVQCTPDLSSVQCSDCLVKAISDLPGCFGGKIGGRILRPSCNFRYEIYRFYNATDDSTPPSEGKSNTSRTIIAIVVPIASVLVLFILVCICLRMRKSWKHIENDDDEADNEIKSSETLQMKYDTIIAATNNFSEANKLGQGGFGPVYKGKLTDGQEIAVKRLSGNSSQGDTEFKNEVLLVAKLQHRNLVRLLGFCLERQERLLVYEFIPHKSLDYFIFDPIKRAQLSWEERYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLNAEMSAKISDFGMARLVERDQTQDNTSRVVGTFGYMAPEYVLHGQFSVKTDVFSFGVLVLEIVTGRKNSEVFHGENPENLVSYAWRNWREGTATRIVDPEIREGSRDEIMRCIHIGLLCVQDDVADRPSMASVEVMLNSYSATFPLPSQPASYMNSSRNWSGEYTSGATRSNELKNQSVKALSNNASMFHPFPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2033 653 Gene3D Phosphorylase Kinase; domain 1 287 401 - -
Acco03g2033 653 FunFam Cysteine-rich receptor-like protein kinase 10 288 401 - -
Acco03g2033 653 SUPERFAMILY Protein kinase-like (PK-like) 312 620 IPR011009 -
Acco03g2033 653 CDD STKc_IRAK 332 597 - -
Acco03g2033 653 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Acco03g2033 653 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Acco03g2033 653 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Acco03g2033 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 131 - -
Acco03g2033 653 Gene3D Transferase(Phosphotransferase) domain 1 402 604 - -
Acco03g2033 653 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2033 653 FunFam Cysteine-rich receptor-like protein kinase 28 402 604 - -
Acco03g2033 653 SMART serkin_6 326 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2033 653 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Acco03g2033 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Acco03g2033 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 632 - -
Acco03g2033 653 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Acco03g2033 653 Gene3D - 25 130 IPR038408 -
Acco03g2033 653 Gene3D - 138 244 IPR038408 -
Acco03g2033 653 Pfam Protein tyrosine and serine/threonine kinase 329 592 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2033 Acco-ChrAcco03 46464113 46467225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2033 22 615 Receptor kinase-like Gene Family AT4G38830 51.373 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2033 PK_Tyr_Ser-Thr 1.1e-47 CL0016