Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2032 ATGAAGAACGGAGAAGAATCGAAGATCTGGACTAGAAAGTTGAACACCAGTCGATCTACGGAGGAGGTGTGTGGATCTTATTGCCATCGCCGAAGATCCGTCAAGAGGATGACTCTTCGTGGTGGTTGGCTGGACGTTGTCGTCTGTGGGTGGCTGGAGGTCAATGATGAGGTGATGGGGTTAGGTTCTGAAGAAGATGAAGAATCACTTCGTTTTAAAAGAGGAGGGTTCTTCCGGTTTGGGAGTGTCATTCCTGGAATGAATTTGACGGATGAGAAGAGCGTATCTAGCTCCGAATTTAACCGATTCAATCAGTCGTTGTTCGGATTGTTGGATGATTTGGACACGCGAGCTGCGAAATCGGAGACGGATAAGAAGTTCGCAACAGGGGAAGTTAGGGTCACGAGCTCTGTGACTGTTTATGGGCTTGCGCAATGCTCGAAGGACTTGACTTCTGAACAATGTGAAACGTGTTTGCAGAATGCTATCGGAAATCTTCCGGCTTGCTGCGAGGGAAAGCAAGGCGCGAGAGTTCTGCTTTCGTCCTGTAATGTGAGATATGAGGTTTTCCAATTCTACGATTCAACCACTTCGTCACTTGGAAAGAAGAAATATGGATCAGGAATAATTGCAATGATTGTTATCCTTGTCGTTGCTTTTGTAATCCTCTTATGTTTAGGCAGCTATTTCCTGCTGAGAAGATCAAGGAAGAGTCACAGGACTGTTCTCAGAGAACATTTTGGAAATGAAAGTGAGGCTTTGGAGTCGTTGCAATTTAGTTTGGCTACAGTTGAAGCAGCTACAAACAAGTTTTCACATCGGAATGAGATAGGCAAGGGTGGATTTGGAGTAGTTTACAAGGGTGTTCTTCAAGACAGACGAGAAATAGCAGTTAAAAAACTTTCTAAATGTTCAGGACAAGGTTCAATAGAATTCAAAAATGAGATTTTACTCATAGCCAAGCTTCAACACAGGAATCTTGTGGCTTTGTTAGGATTTTGCTTGGAAGCAGAAGAGAAGATGCTTATCTATGAATATGTTCCCAACAAAAGCCTTGATTACTTTTTATTTGATTCTCAAAGGAGAAAACTACTGAATTGGGATCAGCGTTACAAAATCTTGGAAGGAATTGCACGAGGAATTCTTTATTTACATGAGTACTCAAGACTCAAAGTTATACATCGTGATCTTAAACCTAGTAACGTGTTGTTGGATAATAATATGAACCCAAAAATTGCAGACTTTGGTTTGGCAAAAATAGTTGCTATAGATGATGATCAAGGAAGAACAAGAAGAATAGTTGGAACATACGGCTACATGTCTCCAGAATATGCTATGCATGGACAATTTTCTGAAAAGTCTGATGTATTCAGTTATGGAGTCATAGCTTTGGAGGTAATTAGTGCAAAAAGAAATGCCCGATTGCATGAGTCGCATGATGCTAATGACCTTATTAGTCATGCTTGGAGGCAATGGAGGGAACAAACGCCGTTAGAAATACTGGACCCATATTTAAAAGAAGCTTGCCCTCACAGTGATGCCATGAAGTGCATTCAGATTGGCTTGTTATGGGTCCAAGAAAATCCAAATGATAGACCCACAATGGCAAACGTTGTTTCATATTTTAGTAGTCCTCCAGCCGAATTGCCTCTACCTCGGCAACCAGCATTTTTGAGGAACAATGTAATGGCAGGGGAATCCAGTTCAGGCTCTAGATCTTTATACTCGGTAAATGATATGTCTATCACCAATTCTTTTCCTCGGTGA 1767 0.416 MKNGEESKIWTRKLNTSRSTEEVCGSYCHRRRSVKRMTLRGGWLDVVVCGWLEVNDEVMGLGSEEDEESLRFKRGGFFRFGSVIPGMNLTDEKSVSSSEFNRFNQSLFGLLDDLDTRAAKSETDKKFATGEVRVTSSVTVYGLAQCSKDLTSEQCETCLQNAIGNLPACCEGKQGARVLLSSCNVRYEVFQFYDSTTSSLGKKKYGSGIIAMIVILVVAFVILLCLGSYFLLRRSRKSHRTVLREHFGNESEALESLQFSLATVEAATNKFSHRNEIGKGGFGVVYKGVLQDRREIAVKKLSKCSGQGSIEFKNEILLIAKLQHRNLVALLGFCLEAEEKMLIYEYVPNKSLDYFLFDSQRRKLLNWDQRYKILEGIARGILYLHEYSRLKVIHRDLKPSNVLLDNNMNPKIADFGLAKIVAIDDDQGRTRRIVGTYGYMSPEYAMHGQFSEKSDVFSYGVIALEVISAKRNARLHESHDANDLISHAWRQWREQTPLEILDPYLKEACPHSDAMKCIQIGLLWVQENPNDRPTMANVVSYFSSPPAELPLPRQPAFLRNNVMAGESSSGSRSLYSVNDMSITNSFPR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2032 588 FunFam Cysteine-rich receptor-like protein kinase 10 86 192 - -
Acco03g2032 588 CDD TM_EGFR-like 206 239 - -
Acco03g2032 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Acco03g2032 588 FunFam cysteine-rich receptor-like protein kinase 10 347 549 - -
Acco03g2032 588 Pfam Protein kinase domain 273 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2032 588 ProSiteProfiles Gnk2-homologous domain profile. 85 192 IPR002902 -
Acco03g2032 588 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 120 566 - -
Acco03g2032 588 SMART serkin_6 271 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2032 588 Gene3D - 87 192 IPR038408 -
Acco03g2032 588 ProSitePatterns Protein kinases ATP-binding region signature. 277 300 IPR017441 GO:0005524
Acco03g2032 588 Gene3D Phosphorylase Kinase; domain 1 233 346 - -
Acco03g2032 588 SUPERFAMILY Protein kinase-like (PK-like) 255 573 IPR011009 -
Acco03g2032 588 Pfam Salt stress response/antifungal 98 188 IPR002902 -
Acco03g2032 588 CDD STKc_IRAK 277 542 - -
Acco03g2032 588 ProSiteProfiles Protein kinase domain profile. 271 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2032 588 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 232 346 - -
Acco03g2032 588 Gene3D Transferase(Phosphotransferase) domain 1 347 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2032 Acco-ChrAcco03 46454260 46459692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2032 66 588 Receptor kinase-like Gene Family AT4G05200 44.245 2.03e-164 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2032 Pkinase 1e-47 CL0016