Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2031 ATGAAAAACACCAACACCATTCCTAGCTCCGAACGGGGTCGATTCGACAACTTGCTAGCGAACATGTTGAATGATGTGACTCAAAAGGCTAATACCCAGACGGGGAAGAGGTTCGCTACAGCGGAAGTGAACTTCACGTCGTCGGAAACCTTGTACGGCCTCGCTCAGTGCATTCCTGATTCTCCCAATTGTAATTCTTGTTTCAGTAGTGCCGTTGCTTCTCTTCCAGGTTGCTGTGATGGAAGCAAAGGAGCAACGATTTTGGTTCCAATATGTACTCTAAGATACGAATTTTATCCGTTTTACAATATAACCCATGTATCCTCTGAACCACTAGTTCCTCCTACTTCAGGAAGTAGGAATATCTCATTGATTGTTGCGATTGTTGTCCCGGTTGTTGTTGTTTTGGCACTTTTCGTTGTGGGTTGTTGTTTCCTCCGTAAGAGAGCAAGCAAGAAGTACAACACATTCACACAGGATTCAACTGGGATTGATGTCTCAGAAATAGAGTCTTTGCGATTTGAAATGGCTACAATAGAAGCTGCCACGAAAAAGTTCTCGGATGAGCACAAGATTGGCCAAGGTGGATTTGGGGCAGTTTACAAGGGCATCCTTCCAAACGGACAGGAGATAGCTGTGAAGAGGTTGTCTGTAACCTCCTTGCAGGGTTCTTTGGAGTTCACAAATGAGGCTGCTCTTGTGGCCAAGTTTCAACACAGGAATTTAGTGAGGCTGTTGGGATTTTGCTTAGAGGGGCAAGAGAAGATACTTATCTATGAATATATGCCAAACAGAAGCCTTGACAAGTTTCTATTTGATCCAGAAAGAAAGAGAATACTAGATTGGTCGAAACGCTACAAGATTATTGCAGGCGTTGCTCGAGGAATGCTATATCTCCATGAGGATTCTCAACTTAGAATAATTCATCGTGATCTCAAAGCTAGTAATGTTTTACTAGATGCTAATATGAATCCAAAAATTTCAGACTTTGGCATGGCAAAAATCTTTCAAGGTGATCAGACTCAAGTAAATACAAGAAGAATAGTTGGGACCTATGGTTACATGTCTCCAGAATATGCAATGCATGGGCAATATTCTGTAAAGTCAGATGTTTTTAGCTTTGGTGTCCTGCTTTTAGAGATTATTACTGGCAAGAAGAACACTGATCTGTACCAATCACCTCAAGCCAATGACCTCTCAAGTTATGCCTGGAATAATTGGACACAAAAAACACCTTTGGAGATGTTGGATCCAACACTGAGAGGTTCTTATTCGAGAAATGAAGTAATAAGATGCATTCATATTGCTTTATTATGTGTTCAGGAGAATCCATCTGATAGACCTTCAATGGCAAATATAGTACTTATGCTCAATAGTTATTCTGTTACTTTGTCATTACCTCGAAAACCTGCATCCTTTATGCGTAGAAGAACACCAAACAGGCAAAACAACAAGGGTGTTGATTCAGACAAATCTACCAGTTCGATTCTAAGGTCTACAAATGAAGAACCCATTACTGAAGTTTACCCTCGATAA 1536 0.4089 MKNTNTIPSSERGRFDNLLANMLNDVTQKANTQTGKRFATAEVNFTSSETLYGLAQCIPDSPNCNSCFSSAVASLPGCCDGSKGATILVPICTLRYEFYPFYNITHVSSEPLVPPTSGSRNISLIVAIVVPVVVVLALFVVGCCFLRKRASKKYNTFTQDSTGIDVSEIESLRFEMATIEAATKKFSDEHKIGQGGFGAVYKGILPNGQEIAVKRLSVTSLQGSLEFTNEAALVAKFQHRNLVRLLGFCLEGQEKILIYEYMPNRSLDKFLFDPERKRILDWSKRYKIIAGVARGMLYLHEDSQLRIIHRDLKASNVLLDANMNPKISDFGMAKIFQGDQTQVNTRRIVGTYGYMSPEYAMHGQYSVKSDVFSFGVLLLEIITGKKNTDLYQSPQANDLSSYAWNNWTQKTPLEMLDPTLRGSYSRNEVIRCIHIALLCVQENPSDRPSMANIVLMLNSYSVTLSLPRKPASFMRRRTPNRQNNKGVDSDKSTSSILRSTNEEPITEVYPR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2031 511 MobiDBLite consensus disorder prediction 471 511 - -
Acco03g2031 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Acco03g2031 511 MobiDBLite consensus disorder prediction 476 502 - -
Acco03g2031 511 Pfam Salt stress response/antifungal 10 98 IPR002902 -
Acco03g2031 511 Gene3D Transferase(Phosphotransferase) domain 1 262 467 - -
Acco03g2031 511 Pfam Protein tyrosine and serine/threonine kinase 189 456 IPR001245 GO:0004672|GO:0006468
Acco03g2031 511 FunFam cysteine-rich receptor-like protein kinase 10 262 464 - -
Acco03g2031 511 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Acco03g2031 511 SUPERFAMILY Protein kinase-like (PK-like) 171 483 IPR011009 -
Acco03g2031 511 Gene3D - 1 101 IPR038408 -
Acco03g2031 511 SMART serkin_6 186 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2031 511 ProSiteProfiles Gnk2-homologous domain profile. 1 101 IPR002902 -
Acco03g2031 511 ProSiteProfiles Protein kinase domain profile. 186 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2031 511 Gene3D Phosphorylase Kinase; domain 1 147 261 - -
Acco03g2031 511 FunFam Cysteine-rich receptor-like protein kinase 10 147 261 - -
Acco03g2031 511 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 495 - -
Acco03g2031 511 CDD STKc_IRAK 192 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2031 Acco-ChrAcco03 46436929 46439193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2031 1 511 Receptor kinase-like Gene Family AT4G05200 51.224 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2031 PK_Tyr_Ser-Thr 4.6e-52 CL0016