Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2025 ATGATTATCAATGGGAAGAAGAATAGTTCTTTCTACGAAATAGAAGGTGCTGCGGACCTGCTTAGCTATGCTTGGAAACTTTGGAAGGATGGTGAACCTTTGGAACTGTTGGACCCCACAATAAGAGACTCTTACACATCAAATGAAGTAGTGAGATGCATCCACATAGGTCTATTGTGTGTTCAACAAGATCCAGCAGATAGGCCTTCAATGGCTTCCATAGTTCTGATGCTTGATAGTTATTCTGTGACTCTGCCAACACCTTCACAGCCTGCATTTTTTGTACAAAGTGGAACTGATCCAAACATGCCAAAGGACTTCAAATTCGGTCAATCTACGAGCAAGTCAGCACCAATGTCAGTCAACGAAATGTCTGTCAGTGAAGTAATGCCTCGAGTACTGAAACATGAAATGGAAGATTTGAATCTTGCAGCTGCACTTTCACAAGAGTACCGGAGTTGCTGTATTGGGAAGGTGGGGGGAGTAGTCCTTTCTCGCAGTTGTAATATAAGGTATCAAGTGTACCCCTTTCAAGAGCCAACTCCGCCGCCGCCAGAGACCCCTTCCAATGTAGAAAGGAAAGGTCACTCAACAAGGACTGTTGTGATTGTTGTGATTTCTTCGGTCGGTGGTTTGCTGATATTTGTTTTTCTTGCGTACTATCTATTAAAGAGTCTAATAAAGACGAGATGCAATGTTGTTCTCAGACAAAACTATTTTGGAAATGAAACCAATAATTTAGAGCCTTTGCGATTTAGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTCACATGAAAAATGTTTAGGCCAAGGTGGATTTGGAAGAGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAAATAGCTATCAAGAGACTTTCAAAAAGTTCTGATCAAGGTGCAGAAGAATTCAAGATTGAGGTCTTATTAATTGCCAAACTCCAGCATAGAAATTTGGTAGCGTTGCTTGGATTTTGCATAGAAGGACGAGAGAAAGTTCTTATTTATGAATATGTTCCGAATAAAAGCCTTGACAACTTTCTATTTGGTTCCCAAAGAGGCAGAGTATTGAATTGGGTAGAGCTCTGTAACATTATCGGAGGAGTTGCTCGAGGAATTCTTTATCTCCATGAATATTCTCAACTTAAAGTTATACATCGTGATCTAAAACCAAGCAATATTTTATTAGATAATGAAATGAATCCCAAAATTTCAGATTTTGGCTTAGCTAAGTTGGTTGCTATAAACACGAATGAGGGGAGTACAAATAGAATAGTTGGAACATACAGTTATATGTCTCCAAAATATGCAATGTACGGGCAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGGGTTATAGTTTTAGAAATTATTAGTGGAAAGAAGAATGCAAGCCGTCTTGGTCCATCACAATATGCCGAGGGCCTCTTAAGCTATGCTTGGAAGCAATGGAAGGAGGAAAAATTAGTGGAGATATTGGATTCAAATATAGAAGAATTCGGATCATATAATGAAGTGATCAAGTGTATCCAGATTGGTTTGTTATGCGTTCAAGAAAATCCAGATTCAAGACCAACAATGACTGAGGTTGTTTCATATCTTAGTAATGATTTCAGTCAACTGCCATTGCCACATGAACCTGCATTCTCTCTACATGTTGGAATGGAGTCAAGTACCAATAGTGGAAGTAATAATGAATCAGGCTCCACTATTCAAGTGTCTGTGAGCGAATTCTTTCCTCGTTAG 1752 0.3876 MIINGKKNSSFYEIEGAADLLSYAWKLWKDGEPLELLDPTIRDSYTSNEVVRCIHIGLLCVQQDPADRPSMASIVLMLDSYSVTLPTPSQPAFFVQSGTDPNMPKDFKFGQSTSKSAPMSVNEMSVSEVMPRVLKHEMEDLNLAAALSQEYRSCCIGKVGGVVLSRSCNIRYQVYPFQEPTPPPPETPSNVERKGHSTRTVVIVVISSVGGLLIFVFLAYYLLKSLIKTRCNVVLRQNYFGNETNNLEPLRFSLATIEAATNKFSHEKCLGQGGFGRVYKGVLSNGQEIAIKRLSKSSDQGAEEFKIEVLLIAKLQHRNLVALLGFCIEGREKVLIYEYVPNKSLDNFLFGSQRGRVLNWVELCNIIGGVARGILYLHEYSQLKVIHRDLKPSNILLDNEMNPKISDFGLAKLVAINTNEGSTNRIVGTYSYMSPKYAMYGQYSEKSDVFSFGVIVLEIISGKKNASRLGPSQYAEGLLSYAWKQWKEEKLVEILDSNIEEFGSYNEVIKCIQIGLLCVQENPDSRPTMTEVVSYLSNDFSQLPLPHEPAFSLHVGMESSTNSGSNNESGSTIQVSVSEFFPR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2025 583 Gene3D Transferase(Phosphotransferase) domain 1 340 543 - -
Acco03g2025 583 Gene3D Transferase(Phosphotransferase) domain 1 2 86 - -
Acco03g2025 583 Gene3D Phosphorylase Kinase; domain 1 229 339 - -
Acco03g2025 583 SUPERFAMILY Protein kinase-like (PK-like) 248 562 IPR011009 -
Acco03g2025 583 FunFam cysteine-rich receptor-like protein kinase 10 340 543 - -
Acco03g2025 583 SUPERFAMILY Protein kinase-like (PK-like) 18 97 IPR011009 -
Acco03g2025 583 CDD STKc_IRAK 270 536 - -
Acco03g2025 583 Pfam Protein kinase domain 265 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2025 583 ProSiteProfiles Protein kinase domain profile. 264 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2025 583 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Acco03g2025 583 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 229 339 - -
Acco03g2025 583 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 184 572 - -
Acco03g2025 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Acco03g2025 583 MobiDBLite consensus disorder prediction 556 583 - -
Acco03g2025 583 SMART serkin_6 264 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2025 Acco-ChrAcco03 46400256 46406641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2025 2 97 Receptor kinase-like Gene Family AT4G23190 53.535 2.36e-28 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2025 Pkinase 1.2e-48 CL0016