Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2020 ATGATTTTTTGTCTCGCCTACTATCTCTTAAAGAGTTCAATAAAAAAGAGACGCAGCGCTGTTCTCAGACAAAAATACTTTGGAAATGAAAGCAACAATTTAGAGCCTCTGCAATTTAGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTCACATGAAAACTCTTTAGGCCGAGGTGGATTTGGACAAGTTTACAAGGGTATTCTTTCAAATGGTCAAGAAATAGCAGTCAAGAGACTTTCGAAAACTTCTGGCCAGGGTGGAGAAGAATTCAAGAACGAGGTTTTATTGATTGCCAAACTCCAACACAGGAATTTGGAAAGTACAAATAGAATAGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGTATGGGCAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAAGAATGCAAGTCGTCATAGTCAATCACAATCACTATATAGCGATGGCCTATTGAGTTATACTTGGAAGCGATGGAAGGAGGAAAAGTTGCTGGAGATATTAGATTTAAATATAAATGGATTTGGATCATATAATGAAGTGATCAAGTGCATCCAGATTGGCTTGTTATGTGTTCAAGAAATTCCAGATTCAAGACCTACAATGGCTGAGGTTGTTTCATATCTTAGTAATGATTCCATTCGACTGCCATTGCCACAGGAACCTGCTTTCTTTCTACATGGTGAAATGGGGCCTATTACCAGTGGATGTAACGAATCAGCCTCGGCTATTGAAATGTCTATGACTGAATTCTTTCCTCGTTAG 813 0.3702 MIFCLAYYLLKSSIKKRRSAVLRQKYFGNESNNLEPLQFSLATIEAATNKFSHENSLGRGGFGQVYKGILSNGQEIAVKRLSKTSGQGGEEFKNEVLLIAKLQHRNLESTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIVLEIISGKKNASRHSQSQSLYSDGLLSYTWKRWKEEKLLEILDLNINGFGSYNEVIKCIQIGLLCVQEIPDSRPTMAEVVSYLSNDSIRLPLPQEPAFFLHGEMGPITSGCNESASAIEMSMTEFFPR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2020 270 Gene3D Transferase(Phosphotransferase) domain 1 109 233 - -
Acco03g2020 270 Pfam Protein tyrosine and serine/threonine kinase 54 107 IPR001245 GO:0004672|GO:0006468
Acco03g2020 270 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2020 270 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Acco03g2020 270 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 109 254 - -
Acco03g2020 270 Gene3D Transferase(Phosphotransferase) domain 1 38 108 - -
Acco03g2020 270 SUPERFAMILY Protein kinase-like (PK-like) 39 235 IPR011009 -
Acco03g2020 270 Pfam Protein kinase domain 109 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2020 Acco-ChrAcco03 46268914 46270745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2020 28 270 Receptor kinase-like Gene Family AT4G23280 36.577 2.99e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2020 Pkinase 9e-10 CL0016