Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2017 ATGCGTCTTAATCACATGGTATTGGTAACTGTCAATGGCAAGGATGTAACGGCGGGGTATTTTATTCGAACTAGAGCTATTCTAATGGAAAATATATGGATGAGCATTTCAATTATTGCAATGGCTGTGAAGGCGTTGACTGATGCTGCTTATCCCCCAAATAATAGTGGTGTTCCAGTAATTACAGGAAAAAATAAAGACAACTCGCGAACAATCATAATAGCGGTATCCCTTAGTCTTCTCTCGATCACGCTTTTTTGTTTCGGCGTTTATTACTGGAAGAGAAAAAAGAGCCAGCTGAGTGATAAGGCGATTCTGAAGAAAAATTTTGGAAGTGAAGGGGCCACGTTAGAGTCATTGCAGTTCAATTTTGCAACAATTGAAGTTGCAACAGATAAGTTCTCGATTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTACATGGGCGTTCTTCCCGATGTTGGTATTAATGAAACTAGGGGGAGCACAACTAGAATTGTTGGAACATTGGGGTACATGTCTCCAGAATATCTTAAGTTTGGACTATTTTCTGAGAAATCAGATGTTTTCAGCTTTGGAGTCATTGTTTTGGAAATTATAAGTAGAAAGAATATCAATTCTGACAGTGAATCTCATGAATCTCAGTATGGTGGTGGACTCTTAAGTGATGCTTGGAAGCATTGGAGGGGTGAAAATTTGATCGCCATATTGGATTCAAATTTGACAGAAACAGGGTCACACTGTGAAATAATGAGATGCATCCATATCGGCTTGTTGTGTGTTCAAGGAAATCCACAAGTTAGGCCTTCCATGAACAAAGTTGTTAAATATATAAGTAATGATTCAATGAAATTGCCAATTCCTCAAGAACCAGCATTCTTCTTGCCTAGTCAAACAGAAGCAGCAGAAACTAGTAGAGCAATGGAGACTCAACTTGCCAACCACAATCAATATTCCATCAATGAAATATCGGAGAGTATATTATTTCCTCGCTAG 1002 0.3852 MRLNHMVLVTVNGKDVTAGYFIRTRAILMENIWMSISIIAMAVKALTDAAYPPNNSGVPVITGKNKDNSRTIIIAVSLSLLSITLFCFGVYYWKRKKSQLSDKAILKKNFGSEGATLESLQFNFATIEVATDKFSIENRIGKGGFGEVYMGVLPDVGINETRGSTTRIVGTLGYMSPEYLKFGLFSEKSDVFSFGVIVLEIISRKNINSDSESHESQYGGGLLSDAWKHWRGENLIAILDSNLTETGSHCEIMRCIHIGLLCVQGNPQVRPSMNKVVKYISNDSMKLPIPQEPAFFLPSQTEAAETSRAMETQLANHNQYSINEISESILFPR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2017 333 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 157 - -
Acco03g2017 333 Gene3D Transferase(Phosphotransferase) domain 1 158 311 - -
Acco03g2017 333 Pfam Protein tyrosine and serine/threonine kinase 170 278 IPR001245 GO:0004672|GO:0006468
Acco03g2017 333 SUPERFAMILY Protein kinase-like (PK-like) 119 156 IPR011009 -
Acco03g2017 333 SUPERFAMILY Protein kinase-like (PK-like) 163 307 IPR011009 -
Acco03g2017 333 Gene3D Phosphorylase Kinase; domain 1 108 157 - -
Acco03g2017 333 ProSiteProfiles Protein kinase domain profile. 1 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2017 Acco-ChrAcco03 46196266 46202621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2017 139 326 Receptor kinase-like Gene Family AT4G21400 41.489 2.19e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2017 PK_Tyr_Ser-Thr 1.5e-08 CL0016