Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2012 ATGAAAAAATACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTTAGTTTGGCTACTATTGAAGCTGCAACAAATAAGTTTTCAAAGGAGACTAGTTTAGGTCAAGGTGGATTTGGACAAGTTTACAAGGTTAGAAATGCTGTCAATGTTAAATATCATGAATATGCAATGTTTGGACAATATTCTGAAAAGTCAGATGTTTTTAGCTTTGGAGTAATAGTATTAGAAATTATATGTGGAAGGAAGATTACAAGCCATCCTGATCAATCTCATGGCCTCCTAAATTATGCTTGGAATCAATGGAAGGAAGAAAAGATTTTAGAGATATTGGATTCAAGTCTAAATAATGAATCTGAATCGCTTAATGAAGTGAACAAGTGTGTCCAAATTGGGTTGTTATGTGTTCAAGAAGATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTCAGCAATGATTCAATTCAATTGCCATGTCCACAAGAGCCTGCATTCTTTCTGGAGGGCCAAATGGAGCTCAACACTGAAAGTAAGGAATCTATTAATGAAGTGTCTATAAGTGGTTTCTATCCTCGTTAG 591 0.3587 MKKYFGSESNTLEPLQFSLATIEAATNKFSKETSLGQGGFGQVYKVRNAVNVKYHEYAMFGQYSEKSDVFSFGVIVLEIICGRKITSHPDQSHGLLNYAWNQWKEEKILEILDSSLNNESESLNEVNKCVQIGLLCVQEDPEARPSMATVVSYLSNDSIQLPCPQEPAFFLEGQMELNTESKESINEVSISGFYPR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2012 196 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 46 - -
Acco03g2012 196 SUPERFAMILY Protein kinase-like (PK-like) 56 176 IPR011009 -
Acco03g2012 196 SUPERFAMILY Protein kinase-like (PK-like) 12 49 IPR011009 -
Acco03g2012 196 Pfam Protein tyrosine and serine/threonine kinase 56 154 IPR001245 GO:0004672|GO:0006468
Acco03g2012 196 Gene3D Transferase(Phosphotransferase) domain 1 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2012 Acco-ChrAcco03 46111773 46113466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2012 56 196 Receptor kinase-like Gene Family AT4G23140 43.137 7.93e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2012 PK_Tyr_Ser-Thr 6.6e-09 CL0016