Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2010 ATGAAGAAGAAGTTTGGGACGAATGCGACGACGGTGGAGTTTCAAACTCTGTATGTTCTGGTTCAGTGCACGCCGGACCTTTCGACGGCGGATTGCAAAAGGTGTCTGAGTGGTGTGATTGGGGACTTTTCATGGTGTTGTGATGGGAAGATAGGAGGAAGAGTGCTATATCCAAGTTGCCTTGCTCGTTATGAATTGTATAAGTTCTTTGATCCTTCTACGCCTATTCGGCCAGTTCCGCTGCCGCCTCCTCCGGCTCTATTTCCTCCTTCAAATCGTGTAAAAAGGAGAAGCCGATTACGGACCATTGGGATAGCTGTGGTTACTCCTGTTGGAGCTGTGATACTTTTATGTTTGGCCTACTTTTTATTGAAGAATCAAATAAAGAAGATGCGTATGGCTTTTCTCATGCAAAAATACTTTGGAAGCGAAAGAAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACTATTGAAGCTGCAACAAATAAATTTTCAAAGGAGACTAGTTTAGGTCAAGGTGGATTTGGACAAGTTTACCAGGGCATTCTTTCAAATGGTCGAGCAATAGCTGTAAAAAGACTTTCAAAAAGTTCTGGTCAAGGAGCTGAAGAATTTAAGAATGAGGTTTTATTAATAGCCAGACTCCAGCATAGAAATTTGGTGGCCTTGCTGGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAATAAAAGTCTTGATTATTTTCTATTTGGTTCGGAAAAGGGAATGGTATTAAATTGGGAGAAGCGTTATAAAATTATAGGAGGAGTTGCTCGAGGAATTCTCTACCTTCATGACTATTCTCGAGTTAAAATTATACACCGTGATCTCAAGCCTAGCAATATTTTGTTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATGGTTGGAATCAATGAAATTGACAGAAATACAAGTAAAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGAAAATATTCCGAAAAATCAGACGTGTTTAGCTTTGGAGTTATAGTGTTAGAAATTATTAGTGGACGGAAGATTACAAGTCATCCTAATCAATCTCATGGCCTCCTGAACTTTGCTTGGAATCAATGGAAGGAAGAAAAGGTTTTAGAGATATTGGATTCAAATCTAAATGAATCTGTATCGCTTACTGAAGTGAACAAGTGCGTCCAAATTGGGTTGTTATGTGTTCAAGAAGATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTCAGCAATGATTCCATTCAATTGCCATTTCCACAAGAACCTGCTTTCTTTCTGGAGGACCAAATGGAGCTCAATACTGAAAGTAAAGAATCCATTAATGAAATGTCTATAAGTGACTTCTATCCTCGTTAG 1431 0.3871 MKKKFGTNATTVEFQTLYVLVQCTPDLSTADCKRCLSGVIGDFSWCCDGKIGGRVLYPSCLARYELYKFFDPSTPIRPVPLPPPPALFPPSNRVKRRSRLRTIGIAVVTPVGAVILLCLAYFLLKNQIKKMRMAFLMQKYFGSERNTLEPLQFSLATIEAATNKFSKETSLGQGGFGQVYQGILSNGRAIAVKRLSKSSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNKSLDYFLFGSEKGMVLNWEKRYKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARMVGINEIDRNTSKIVGTYGYMSPEYAMFGKYSEKSDVFSFGVIVLEIISGRKITSHPNQSHGLLNFAWNQWKEEKVLEILDSNLNESVSLTEVNKCVQIGLLCVQEDPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEDQMELNTESKESINEMSISDFYPR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2010 476 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 15 472 - -
Acco03g2010 476 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 127 240 - -
Acco03g2010 476 Pfam Protein kinase domain 166 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2010 476 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Acco03g2010 476 Pfam Salt stress response/antifungal 13 67 IPR002902 -
Acco03g2010 476 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 241 442 - -
Acco03g2010 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Acco03g2010 476 ProSiteProfiles Gnk2-homologous domain profile. 1 69 IPR002902 -
Acco03g2010 476 Gene3D Phosphorylase Kinase; domain 1 126 240 - -
Acco03g2010 476 ProSiteProfiles Protein kinase domain profile. 165 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2010 476 CDD STKc_IRAK 171 434 - -
Acco03g2010 476 SMART serkin_6 165 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2010 476 Gene3D - 1 69 IPR038408 -
Acco03g2010 476 Gene3D Transferase(Phosphotransferase) domain 1 241 441 - -
Acco03g2010 476 SUPERFAMILY Protein kinase-like (PK-like) 149 459 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2010 Acco-ChrAcco03 46073917 46076935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2010 3 476 Receptor kinase-like Gene Family AT4G05200 47.200 9.58e-154 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2010 Pkinase 3e-50 CL0016