Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2009 ATGTATTGTCTGGTTCAGTGCACGCCGGACCTTTCGCCCCAAGGTTGTACAACATGTCTGAGAGATGCGATTAGGGAGCTTTTCATCTGTACTAATAACAGGAGTATAGGAGGAAGAGTTCTATATCCCAGTTGTAACCTTCGTTATGAATTGTTCACCTTCTATAATTCTAGTGGTAGGCCAGGATCGCCGCCTCCTCCGGCAATTTTTCCGGCAACAAATTCTTCACAAGAAAAAACAAGGACCATTGTGATAGTTGTGGTTTCTGTTGGTGGTGCGGCGATGCTTTTTAGTTTGGTGTTCTTTCTCTTAAGGAGTTTAATAAAGAAGAGAAACAGGACTGAACTCAGACAAAAATACTTTGGAGATGAAAGCAACACTTTAGAGTCTCTACAATTCAGTTTGGCTACTATTGAGGCTGCAACAAATAAGTTCTCGCAGGAAAATTGTTTAGGCCAAGGTGGATTTGGTCAGGTTCACAAGGGTATTCTTTCAAATGGTCAAGAAATAGCGGTAAAGAGACTTTCTAAAGGTTCAGGCCAAGGAGCAGAAGAATTTAAAAATGAAGTTTTACTAATAGCGAGACTCCAGCACAGAAATTTGGTGACCTTAATAGGATTTTGCGTAGAAGAGCAAGAGAAAATTCTTATTTATGAATACGTTCCCAATGAAAGCCTTGATTACTTTCTATTTGGTACCCAGAAAAATAGGAGATTGACTTGGGAGGAGCGTTATGAAATCATAAGAGGAGTTGCTCGAGGGATTCTATATCTTCATGAATATTCTCGCCTTAAAATTATACATCGAGATCTCAAACCTAGCAATATTTTGTTAGACAATGAAATGAATGCAAAAATTTCAGATTTTGGCCTTGCTAGAATGGTTGCTATCAATGAGAATGAGGGAAATACAAGGAGAATTGTTGGAACATACGGCTATATGCCTCCAGAATATGCAATGTTCGGACTATATTCTGAAAAATCAGATGTCTTTAGTTTTGGAGTTATCGTTTTAGAAATTATTAGTGGAAAGAAGAACGTAAGTTGCCATGATGACTCACAGTACGCTGATAGCCTCTTAAGCTATACATGGAATCAATGGACTAATGAAAAGTTGTTAGAGATGTTTGATTCCAATCTGAAAGAGGTGGAATCGTATAATGAAGTAAGCAGGTGCATCCAAATTGGGCTGTTATGTGTTCAAAAGCATCCAGATGCAAGACCTTCCATGGCCACAATTGTTTCATATCTGAGCAATGAATCAATTGAATTGCCACAACCACAGCAACCTGCTATGTTTTTGCGTCCTCGAAAGAGACTTAGTTCTGCAAGTAAAGAATATAGCTCCATTAATGATATGTCTATTAGTGATTTCTTTCCTCGCTAG 1386 0.3853 MYCLVQCTPDLSPQGCTTCLRDAIRELFICTNNRSIGGRVLYPSCNLRYELFTFYNSSGRPGSPPPPAIFPATNSSQEKTRTIVIVVVSVGGAAMLFSLVFFLLRSLIKKRNRTELRQKYFGDESNTLESLQFSLATIEAATNKFSQENCLGQGGFGQVHKGILSNGQEIAVKRLSKGSGQGAEEFKNEVLLIARLQHRNLVTLIGFCVEEQEKILIYEYVPNESLDYFLFGTQKNRRLTWEERYEIIRGVARGILYLHEYSRLKIIHRDLKPSNILLDNEMNAKISDFGLARMVAINENEGNTRRIVGTYGYMPPEYAMFGLYSEKSDVFSFGVIVLEIISGKKNVSCHDDSQYADSLLSYTWNQWTNEKLLEMFDSNLKEVESYNEVSRCIQIGLLCVQKHPDARPSMATIVSYLSNESIELPQPQQPAMFLRPRKRLSSASKEYSSINDMSISDFFPR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2009 461 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 108 220 - -
Acco03g2009 461 Gene3D - 1 54 IPR038408 -
Acco03g2009 461 Gene3D Transferase(Phosphotransferase) domain 1 221 429 - -
Acco03g2009 461 Pfam Protein tyrosine and serine/threonine kinase 148 417 IPR001245 GO:0004672|GO:0006468
Acco03g2009 461 SMART serkin_6 145 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2009 461 ProSiteProfiles Gnk2-homologous domain profile. 1 54 IPR002902 -
Acco03g2009 461 Pfam Salt stress response/antifungal 1 50 IPR002902 -
Acco03g2009 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Acco03g2009 461 ProSiteProfiles Protein kinase domain profile. 145 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2009 461 CDD STKc_IRAK 151 417 - -
Acco03g2009 461 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
Acco03g2009 461 Gene3D Phosphorylase Kinase; domain 1 106 220 - -
Acco03g2009 461 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 456 - -
Acco03g2009 461 SUPERFAMILY Protein kinase-like (PK-like) 129 447 IPR011009 -
Acco03g2009 461 FunFam cysteine-rich receptor-like protein kinase 10 221 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2009 Acco-ChrAcco03 46066864 46069121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2009 1 461 Receptor kinase-like Gene Family AT3G45860 49.592 1.45e-156 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2009 PK_Tyr_Ser-Thr 1.8e-50 CL0016