Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2006 ATGTACCCGTTTTACCATTTATCGCCGGTGATTGCCTCACAAGAACCAATAACTCCAAAAGGAAACAACCGGATCTCTGTAGCCATAATCGTTGCGATTCTGGTTCCAATTGTGACTGTTTTGCTGCTTCTCTTTCTTCTCTCCTGGTTAGTATCCAGGAGGGCAAGCAAGAAGTTCAAATCAGTGCCAGCTGAAGAAAATGAAATTGAAATTTCCAGCGTGGAGTACTTGCAATTTGATCTGGAAACAGTCAAATTGGCCACAAACAACTTCTGCCATGAAAACAAATTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGAACTCTTCCTAATGGGCAAAATATTGCAGTAAAGAGGCTTTCATTGAGCTCTAGGCAAGGTGCAGAAGAATTCAAGAATGAGGTGGTTTTAGTGGCCAAGCTTCAACACAGAAACCTTGTTAGGGTATTGGGATTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATCCCCAACAAGAGCTTGGATCATTTTCTTTTTGATGATGAAAGAAAAAGTATGTTGAATTGGCCAAAACGGTATAAGATCATAAAAGGAATTGCTCGTGGAATACTTTATCTTCATGAAGACTCTCGGCTTAGAATCATACACCGTGATCTCAAAGCTGGTAATATATTATTAGATGAGGACTTCAATCCGAAAATTGCAGATTTTGGTATGGCAAAAATCTTTGGTGCAGATCAAACTCAAGGAAACACAAATAGAATTGTGGGTACATTTGGTTATATGCCTCCGGAATATGCGATGTATGGACAGTTGTCAATAAAAGTAGATGTGTACAGCATTGGTGTGTTGATTTTGGAGATAATAAGCGGACAAAAGAGCACATCCTTTCATGAATCCAACTATGATGAACAGCTCTTGAACTATGCCTGGAGAAAGTGGAAAGACGAGACGCCATTGGAAGTGTTAGACATGAATTTAAGAGATTCATATAACAGAGAGGAAGTGAGCAGATGCATACAGATTGCATTATCATGTGTACAAGAAGATCCAGCTCGAAGGCCAACGATGCAGACAATAGTTCTGATGCTCAACAGTTTCTCAGTTAGTGTAGCAGCACCAGAAAGGCCTCCATTGTTGGTTCAAAGCACAAGTGTTGAACCAAGCCTTCCAATGGAATCATCAGATAAGTCTTCTAATAAAAGCAAATCATCAGTCTCATACTCTGTTGATGAAACTTCCATCACTCAAGTGTACCCTCGTTAG 1260 0.4016 MYPFYHLSPVIASQEPITPKGNNRISVAIIVAILVPIVTVLLLLFLLSWLVSRRASKKFKSVPAEENEIEISSVEYLQFDLETVKLATNNFCHENKLGEGGFGEVFKGTLPNGQNIAVKRLSLSSRQGAEEFKNEVVLVAKLQHRNLVRVLGFCLDGEEKILIYEFIPNKSLDHFLFDDERKSMLNWPKRYKIIKGIARGILYLHEDSRLRIIHRDLKAGNILLDEDFNPKIADFGMAKIFGADQTQGNTNRIVGTFGYMPPEYAMYGQLSIKVDVYSIGVLILEIISGQKSTSFHESNYDEQLLNYAWRKWKDETPLEVLDMNLRDSYNREEVSRCIQIALSCVQEDPARRPTMQTIVLMLNSFSVSVAAPERPPLLVQSTSVEPSLPMESSDKSSNKSKSSVSYSVDETSITQVYPR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2006 419 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 415 - -
Acco03g2006 419 Pfam Protein kinase domain 94 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2006 419 CDD STKc_IRAK 97 363 - -
Acco03g2006 419 MobiDBLite consensus disorder prediction 380 419 - -
Acco03g2006 419 Gene3D Phosphorylase Kinase; domain 1 51 166 - -
Acco03g2006 419 FunFam cysteine-rich receptor-like protein kinase 10 167 369 - -
Acco03g2006 419 SMART serkin_6 91 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2006 419 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Acco03g2006 419 SUPERFAMILY Protein kinase-like (PK-like) 75 395 IPR011009 -
Acco03g2006 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Acco03g2006 419 FunFam Cysteine-rich receptor-like protein kinase 10 53 166 - -
Acco03g2006 419 ProSiteProfiles Protein kinase domain profile. 91 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2006 419 Gene3D Transferase(Phosphotransferase) domain 1 167 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2006 Acco-ChrAcco03 46005670 46008337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2006 1 419 Receptor kinase-like Gene Family AT4G05200 52.995 1.09e-161 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2006 Pkinase 8.5e-49 CL0016