Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2003 ATGATTCGCTTCCTGAATTCTATCACGCCATATTTGCTATTTTGTCTTGTAATCCTTTTGTTTCCTAGAATCATCAAAGGGCACCAGTACTGTAAAAACAAGATTTCAGTTGTGACAATTATTGCCATAGCAGTTCATTCAGCAATACTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAAATGGAGAGCAAGGATAAATGCTTCACATCCTAAAAATGTTGAGATTTCAAGTGTAGAGTCTCTACATTTTGAGTTGGATGCCATCAAAACAGCCACAAACGACTTCTCCCCTGACAATAAACTAGGCCAAGGTGGATATGGCGAGGTGTACAAGGTACAATTTGTTTTTGCATTTAGTAGCTACATGTCTCCTGAATATGCAATACATGGTCATATCTCGGTCAAAACTGATATATACAGTTTTGGCGTCCTAATCCTTGAGATCATTAGTGGCAAGAAGAATACATCTTTCTACGCATCAAACTATGCTGAGAACTTGCTAACCTATGCGTGGAAGCTGTGGAGGGAAGGGACGCCATTAGAGTTGCTTGATTCTAGCCTAAGAAATTCTTGTTCAGGAAATGAAGTTATTAAATGCATCCATATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTTTAAGGCCAACAATACAATCTGTTATGGTGATGCTAAGCAGTCACTCCATCACATTGTCAGATCCTCAAGAACCAGCATTTTTGTTTATTGATCGCCAAAGAACAGATGCAAACAATCGAGCAATATTTTCTGAGAAAAGCTTGGATCAATCTACAAGCACGTCTATACAACGGTCTGTGGATGAAGATCCAATTTCTGACTTGTTTCCTCGTTAG 858 0.3916 MIRFLNSITPYLLFCLVILLFPRIIKGHQYCKNKISVVTIIAIAVHSAILILQVSLCFLCLKWRARINASHPKNVEISSVESLHFELDAIKTATNDFSPDNKLGQGGYGEVYKVQFVFAFSSYMSPEYAIHGHISVKTDIYSFGVLILEIISGKKNTSFYASNYAENLLTYAWKLWREGTPLELLDSSLRNSCSGNEVIKCIHISLLCIQENPALRPTIQSVMVMLSSHSITLSDPQEPAFLFIDRQRTDANNRAIFSEKSLDQSTSTSIQRSVDEDPISDLFPR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2003 285 Gene3D Phosphorylase Kinase; domain 1 59 121 - -
Acco03g2003 285 Pfam Protein tyrosine and serine/threonine kinase 122 224 IPR001245 GO:0004672|GO:0006468
Acco03g2003 285 Gene3D Transferase(Phosphotransferase) domain 1 122 258 - -
Acco03g2003 285 ProSiteProfiles Protein kinase domain profile. 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2003 285 SUPERFAMILY Protein kinase-like (PK-like) 71 117 IPR011009 -
Acco03g2003 285 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 110 231 - -
Acco03g2003 285 SUPERFAMILY Protein kinase-like (PK-like) 122 256 IPR011009 -
Acco03g2003 285 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2003 Acco-ChrAcco03 45962874 45965684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2003 116 285 Receptor kinase-like Gene Family AT4G23140 48.538 5.78e-51 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2003 PK_Tyr_Ser-Thr 2.2e-07 CL0016