Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2002 ATGTATTTCAGATTCATCAGCTCCTTCTCAAATGACAAATTGGTCCGGTATACGATAGCTGAGGATGAAGAGGACCAAGAGATTTGTGCTGAAGAATTCCACAACGATAATAAAGATCTAGTTGCAAGGTATGAATTGTATCCCTTTTATGGGGTGGTTTCGTCGTCACTGCCTTCTCATCGTCCACCACCAGAGCTAGAGTTCACTCCCAATGGTAAAAGCAAGATTTCAGTTGTGACAATTATTGCCATAGCAGTTCAATCAGCGATACTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAAATGGAGAGCAAGGATGAATGATTCACTTCCTAAAAATGTTGAGATTTCAAGTGTAGAGTCTCTACATTTTGACTTGGATGCCATCAAATCAGCCACAAACGACTTCTCCCCTGACAATAAACTAGGTCAAGGTGGATACGGCGAGGTGTACAAGGGTATTTTACCAAATGGACAAGAGCTAGCTGTAAAAAGGCTATCAAGTAGTTCCAAACAAGGCGTATCAGAATTTAAGAATGAAGTAGTTACAATGGCAAAACTTCAACATAGAAATCTTGTAAGCTTTCTTGGATTCTGTTTGCAAGAAGAAGAAAAGATACTAGTATATGAATATTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACCTGAAAACAAGGGTAAATTGACTTGGTCAAATAGAGTCAGCATTATTGAAGGCATTGCAAGGGGGATAATTTATCTTCATGAAGATTCTCAACTCAAAATCATACATCGCGATCTCAAATCTAGCAATGTTTTGTTGGATGAAGATTTGAATGCAAAAATATCTGATTTTGGTATGGCTAGAATTTTTGGAGTTGATCAAACTCAAGCCAATACTAAAAAAATTGTTGGGACATTTGGCTACATGTCTCCTGAGTATGCAATGCATGGTCACATCTCAGTCAAAACTGATATATATAGTTTTGGCGTTCTAATCTTGGAGATTATTAGTGGTAAGAGCAATACATCTTTCTATGCATCAAATTATGCTGAGAACTTGCTGACCTATGCGTGGAAGCTGTGGAGGGGAGGGACGCCATTAGAATTGCTGGATCCTTGTCTAAGAAATTCTTGTCCAGGAAATGAAGTTATTAAATGCATCCATATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTTTAAGGCCAACAATACAATCTGTTATGTTGATGCTAAGCAGTCACTCCATCACATTGTCCGATCCTCAAGAGCCAGCATTTTTGTTTATTGATCACCAAAGAACAGATGCAAACAATCGAGCAATATTATCTGAGAATAGCTCGGATCAATCTACAAGTAGGTCTATTCAACGGTCTGTGGATGAAGATCCAATTTCTGACTTGTTTCCTCGTTAA 1407 0.3838 MYFRFISSFSNDKLVRYTIAEDEEDQEICAEEFHNDNKDLVARYELYPFYGVVSSSLPSHRPPPELEFTPNGKSKISVVTIIAIAVQSAILILQVSLCFLCLKWRARMNDSLPKNVEISSVESLHFDLDAIKSATNDFSPDNKLGQGGYGEVYKGILPNGQELAVKRLSSSSKQGVSEFKNEVVTMAKLQHRNLVSFLGFCLQEEEKILVYEYLPNKSLDNFLFGPENKGKLTWSNRVSIIEGIARGIIYLHEDSQLKIIHRDLKSSNVLLDEDLNAKISDFGMARIFGVDQTQANTKKIVGTFGYMSPEYAMHGHISVKTDIYSFGVLILEIISGKSNTSFYASNYAENLLTYAWKLWRGGTPLELLDPCLRNSCPGNEVIKCIHISLLCIQENPALRPTIQSVMLMLSSHSITLSDPQEPAFLFIDHQRTDANNRAILSENSSDQSTSRSIQRSVDEDPISDLFPR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2002 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Acco03g2002 468 MobiDBLite consensus disorder prediction 438 456 - -
Acco03g2002 468 Pfam Protein tyrosine and serine/threonine kinase 141 406 IPR001245 GO:0004672|GO:0006468
Acco03g2002 468 CDD STKc_IRAK 144 409 - -
Acco03g2002 468 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Acco03g2002 468 Gene3D Transferase(Phosphotransferase) domain 1 214 422 - -
Acco03g2002 468 Gene3D Phosphorylase Kinase; domain 1 100 213 - -
Acco03g2002 468 SUPERFAMILY Protein kinase-like (PK-like) 123 441 IPR011009 -
Acco03g2002 468 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2002 468 FunFam Cysteine-rich receptor-like protein kinase 10 103 213 - -
Acco03g2002 468 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2002 468 FunFam cysteine-rich receptor-like protein kinase 10 214 416 - -
Acco03g2002 468 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 53 452 - -
Acco03g2002 468 MobiDBLite consensus disorder prediction 438 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2002 Acco-ChrAcco03 45937218 45945064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2002 43 468 Receptor kinase-like Gene Family AT4G05200 52.584 1.66e-151 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2002 PK_Tyr_Ser-Thr 3.4e-48 CL0016