Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g2001 ATGAGAGCAAAAAAGAAGGATTCCTCATTTCCCAAACAAAGTGATGTTGACATTTCTAGTGTAGAATCTCTGCAATTTGATTTGGATGTCATCAAATCAGCCACAAACAACTTCTCTCCTGACAATAAACTTGGACAAGGAGGATTTGGCGAAGTGTACAAGGGTATCCTACCTAGTGGACAACAGTTAGCTGTGAAGCGGTTATCAAGTAGCTCAAAACAAGGTGTAGAACAATTTAAAAATGAAGTTGTTATTATGGCAAAACTTCAACATAGAAATCTTGTAAGGCTACTAGGATTCTGCTTGGGTGAGGAGGAAAAGATACTCATCTATGAATTTGTGCCCAGAAAAAGCCTGGATAGATTTCTATTTGGAAATAGGAGTGAACTGAATTGGTCAAAGCGTTATAAGATTATTGAAGGCATTGCAAGAGGGTTGCTTTATCTTCATGAAGATTCTCGACTCAAAATTATACACCGTGACCTCAAAGCTAGTAATGTATTGTTGGATGAAAATTGGAATTCAAAAATTTCTGATTTTGGTATGGCTAGGATTTTTGGAGTCGATCAATCACAAGAAGACACAAGTAGGGTCATGGGTACATATGGCTATATGGCTCCAGAATATGCTATGCATGGTCAGATTTCAGTCAAATCTGATATATATAGTTTTGGTGTCTTGGCCCTAGAGATTATCTCTAGTAAGAAAAATACATCTTTCTACATATCAAGTTGTGCTGAAGACTTGTTAAGCTATGCTTGGAAGCTGTGGAAGAAAGGGACACCATTAGAATTGCTACATCCTAGTCTGAGAGATTCTTATTCAAGAAACCAAGTTATTAAATGCACTCATATGAGCTTGTTGTGTGTTCAGGAAAGCCAAGCTCTGAGACCTACAATACAATCCATTTTGGTGATGTTAGGTAGTGACTCTATGACCCTACCAGATCCTGAAGAGCCAGCATTTTTTGTCGATCATAGTGGAACAGATTCAAACAAACCTGCCATAATTGATGGAAATAGGTCCGATCAATCAACAAGCGGGTCTGTGCAATGGTCTGTGGATAAAGATCCGATTACTGACTTATACCCTCGCTAG 1098 0.3834 MRAKKKDSSFPKQSDVDISSVESLQFDLDVIKSATNNFSPDNKLGQGGFGEVYKGILPSGQQLAVKRLSSSSKQGVEQFKNEVVIMAKLQHRNLVRLLGFCLGEEEKILIYEFVPRKSLDRFLFGNRSELNWSKRYKIIEGIARGLLYLHEDSRLKIIHRDLKASNVLLDENWNSKISDFGMARIFGVDQSQEDTSRVMGTYGYMAPEYAMHGQISVKSDIYSFGVLALEIISSKKNTSFYISSCAEDLLSYAWKLWKKGTPLELLHPSLRDSYSRNQVIKCTHMSLLCVQESQALRPTIQSILVMLGSDSMTLPDPEEPAFFVDHSGTDSNKPAIIDGNRSDQSTSGSVQWSVDKDPITDLYPR 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g2001 365 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Acco03g2001 365 CDD STKc_IRAK 44 307 - -
Acco03g2001 365 Pfam Protein tyrosine and serine/threonine kinase 41 304 IPR001245 GO:0004672|GO:0006468
Acco03g2001 365 ProSiteProfiles Protein kinase domain profile. 38 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2001 365 SUPERFAMILY Protein kinase-like (PK-like) 13 307 IPR011009 -
Acco03g2001 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Acco03g2001 365 Gene3D Transferase(Phosphotransferase) domain 1 114 315 - -
Acco03g2001 365 SMART serkin_6 38 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g2001 365 FunFam cysteine-rich receptor-like protein kinase 10 114 314 - -
Acco03g2001 365 FunFam Cysteine-rich receptor-like protein kinase 10 1 113 - -
Acco03g2001 365 MobiDBLite consensus disorder prediction 324 365 - -
Acco03g2001 365 MobiDBLite consensus disorder prediction 333 354 - -
Acco03g2001 365 Gene3D Phosphorylase Kinase; domain 1 2 113 - -
Acco03g2001 365 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g2001 Acco-ChrAcco03 45926741 45928876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g2001 3 365 Receptor kinase-like Gene Family AT4G05200 57.568 2.69e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco03g2001 PK_Tyr_Ser-Thr 4.3e-49 CL0016