Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1973 ATGAAGCCGCAGAGGACAGATCGGAGACTACAGCAAAGTATAGGCGAGACAACCGGAATTCCTTTTTTTACTGTCCTTGACAGAGAACTGAGTGAGCGAGTGGTTCATCATTGTTACTTGCCCTTCTGCTTTTTCACAACTTTGCTAATCCTAATGGCTGCTTCAGGACATTCTTCCACTGATGAAGTCTTGGAGAACCTTCAAGAGGAGACCAGCAAAGAATCAAAGCTAGAATTTTCCAGCGATGAGGAAGAATTGATTATCAGAATGTATAATCTAGTTGGTGAAAGGTGGCATTTAATAGCAGGGAGGATCCCTGGAAGAACAGCTGAAGAAATTGAAAAGTACTGGACTGCTACACACTCAACAAGTGAATGA 378 0.4259 MKPQRTDRRLQQSIGETTGIPFFTVLDRELSERVVHHCYLPFCFFTTLLILMAASGHSSTDEVLENLQEETSKESKLEFSSDEEELIIRMYNLVGERWHLIAGRIPGRTAEEIEKYWTATHSTSE 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1973 125 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 78 120 - -
Acco03g1973 125 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Acco03g1973 125 CDD SANT 78 117 IPR001005 -
Acco03g1973 125 SMART sant 75 123 IPR001005 -
Acco03g1973 125 Pfam Myb-like DNA-binding domain 78 117 IPR001005 -
Acco03g1973 125 SUPERFAMILY Homeodomain-like 78 119 IPR009057 -
Acco03g1973 125 FunFam MYB-like transcription factor 78 120 - -
Acco03g1973 125 Gene3D - 78 120 - -
Acco03g1973 125 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1973 Acco-ChrAcco03 45576417 45578140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1973 78 120 MYB Transcription Factor Family AT5G35550 62.791 8.24e-15 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco03g1973 Myb_DNA-binding 2.6e-08 CL0123