Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1965 ATGGCTGCCTCCCACCAATCTCTCCTTGACAAACCCAAAAAATCAATTTCCAGAACCATTTGGCTTCTTCTCTCTCTAGCTGCTCTCTTCAGCTCTGCTCTTTTTGCTTCGTCCTATCTCTTCTCACCCACCTCCTTCATCTTCAACCTCTCTCACCCTCACCATATCTGCAACCAAGCCCTCCACAAATCATCATGCTTGTCCCATGTCTCTGAATTACCCAAAGTTTCAATCTTTGCCTCTAAAGACGAAGAATCATCCCACTTACTGCAATCCTTCTTGATGAAAACCACCTCACAAATCCAGAGAACTCTGGACTCAACAAGAGCCATCAAATACAGAATCAACGGTCCAAAACAGCAACAAGCTCTGCAACTCTGTGAGCAGCTTCTGGACTTGTCTCTTGAAAGAGTTTGGGACTCACTGGTGGCTCTCACAGAAAAGAGCACCAAATCCTACCAAGATGCTCACACATGGCTCAGCACTGTCCTCACTAATCACATCACTTGCTTGGATGAGCTAGAAGGATCAGCTCGAGCCCTTATAGAGTCTGAGCTCAATGACTTAGTCTCCAGAGCCAGAACCTCCCTAGCCTTGCTCGTTCATGTTATGCCCTCTCAAATTGATGCCATTGATGAGCCACTTAACGGTGAGTTTCCCTCGTGGGTGACGAGTAAGGACAGGAAGCTTCTGGAAGCTTCTGCTAACGATATAAAGGCTAACGTTGTGGTGGCTAAGGATGGAAGTGGGAGGTTTAAGACTGTGAATGAAGCTGTGGCTTCAGCACCAGATAACAGTAAGACAAGGTATGTGGTATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGACATTGGATCAAAGAAGAAGAATGTGATGCTGGTGGGTGATGGTAAAGATGCGACGATCATCACCGGAAGTTTGAATTTCGTCGATGGAACACCCACTTTCAGAACTGCCACCGTCGCTGCGGTTGGGGATGGATTCATAGCCCAAGACATATGGTTCCAGAACACGGCGGGCCCTCAGAAGCACCAAGCGGTGGCTCTACGCGTCGGCGCCGATCTCTCAGTCATCAACCGCTGCCGTGTGGAGGCCTACCAAGACACACTATACGCCCACTCCAACAGGCAATTCTACCGTGACTCCATAATCTCAGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTGGTGTTCCAGAAATGCTTCCTAGAGGCCCGAAAGCCCATGAATAACCAGAACAACATGGTCACAGCCCAAGGACGCGAAGACCCAAACCAGAACACAGGCACTTCAATCCAACAATGTAACTTAACACCAAGCTCTGATCTCAAGCCAGTCATAGGGTCGATCAAAACCTTTCTGGGTCGTCCATGGAAGGAATATTCAAGAACTGTGGTGATGCAATCTTTCCTCAGTACCCATATTGATCCAGCGGGGTGGGCTCCTTGGGACGATAAGCAATCGACTCTGAAGAATTTGTATTATGGAGAGTACAAAAACAAAGGACCTGGTGCTGGGACAGCTAAGAGAGTGAAATGGCCTGGTTATCATGTGATTACAAGTGCGGCTGAGGCGAGCAAGTTCACGGTGGCTCAGCTCATTCAAGGTGGCACTTGGCTTAAGAATACTGGTGTTGCCTTCATTGAAGGGCTCTAA 1662 0.4826 MAASHQSLLDKPKKSISRTIWLLLSLAALFSSALFASSYLFSPTSFIFNLSHPHHICNQALHKSSCLSHVSELPKVSIFASKDEESSHLLQSFLMKTTSQIQRTLDSTRAIKYRINGPKQQQALQLCEQLLDLSLERVWDSLVALTEKSTKSYQDAHTWLSTVLTNHITCLDELEGSARALIESELNDLVSRARTSLALLVHVMPSQIDAIDEPLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGRFKTVNEAVASAPDNSKTRYVVYVKKGVYKENVDIGSKKKNVMLVGDGKDATIITGSLNFVDGTPTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVEAYQDTLYAHSNRQFYRDSIISGTVDFIFGNAAVVFQKCFLEARKPMNNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVIGSIKTFLGRPWKEYSRTVVMQSFLSTHIDPAGWAPWDDKQSTLKNLYYGEYKNKGPGAGTAKRVKWPGYHVITSAAEASKFTVAQLIQGGTWLKNTGVAFIEGL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1965 553 SUPERFAMILY Pectin lyase-like 239 552 IPR011050 -
Acco03g1965 553 NCBIfam pectinesterase inhibitor domain 31 179 IPR006501 GO:0004857
Acco03g1965 553 FunFam Pectinesterase 235 553 - -
Acco03g1965 553 Pfam Plant invertase/pectin methylesterase inhibitor 54 188 IPR006501 GO:0004857
Acco03g1965 553 PANTHER PECTINESTERASE 34 543 - -
Acco03g1965 553 CDD PMEI-like_4 64 201 - -
Acco03g1965 553 SMART PMEI_2 48 199 IPR006501 GO:0004857
Acco03g1965 553 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Acco03g1965 553 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Acco03g1965 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 203 IPR035513 -
Acco03g1965 553 Gene3D - 235 553 IPR012334 -
Acco03g1965 553 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Acco03g1965 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1965 Acco-ChrAcco03 45524943 45527026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1965 1 553 Carbohydrate Esterase AT1G11580 55.694 0.0 621