Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco03g1936 | ATGGACGGCGATGAACCTCCTTGTCCATCACCGTATGTTTCGTCATCTTCGATTTTCAAGGACATTTCCAATTTCAAAACTCCCAAACGTCCCTCTTATAGCTTCCAATCCCCTTGTGAGAAGTTCTTCACAGCCTCCAAGCAAACGCCACACTCCTCAGCATTCCGTCGCCGGCCATCTATCGCTCCCCCATCTTCAGCTCGAACCAAGAAGTCCACGGCTGCGGCCAGGAAACTCAAGGCATTTGAACTTGAGCAGTCCCAATCCTCGAGAAAAGCTCAATTAAAGAAAGAACAGTCTCTTAAATCTCTTGCCAAGTCTATCACTGTCTGGCTTAATTTTTTGTTCGAAAACCCTGCTAGGTGCGGATGTAACTGGTCCATCGGCGGTGTTCGGATAGGGGATAAGCAATCTGAAGTGGAGGCGACAAAGGGCAAGAGGGATAGTGGTCCTGGGATTTCCATTGGGGTTGATAAAGCCTGGCGTACTCCGAAGAGGCAGAGGAAGATGTGGTCTCGGGCAGAGGAGCGTGTTGACAATGAAAATCCGCTCTTGGAATTGCCAAATTCTATGTTTCCGTACTTGAGGGAATCTCTGGAGGATGTCTGCAGTTTTGAAGATTTGAAACAGCGAATGAGGGTTTATCTGAACTTGGGAAGTTGTAAAGAGATTTTTCAAGTTATGAATCAAGTTACCAAGAATATTGATGAAGGAAGGTTAAAGTTGAAGCCACATTGCCCCATAGTAACAGATCTCGGATTGAAAAATAAAGCCACAAGAATCCTTTTGTGTTATAATCCAATTTGGCTCCGGATTGGATTATATATAATTTTTGGTGGTGACTCCTTGGTGCCTAACGGGGATGATGACTCTGAACAAGAAATCACATTTTTGAAAATGGTTATTGACAAGCAATTTTTCTCACATGCGGGTTTGGCAAAAGCATATGCTTATAACAAGATGGTTGACGGCCTATACAGGCCAGGGTATTATGAGAATTTGGGGAATGTGATTTTAAAGAGAATTTTATTGCTCGTGCTTACACTGGATAGAATTAAATCTCAGAGCAGCCTGTCACTTAAGTATGGTATCGATGGATTGGATGGTGGTTCCCCTTTGTTGTTCAAAGCAGATTCTTGGATTAAATCAAGTGGTCAAGTCATCAGTGAATTCCTATCGTCAGAGGTAACGCACGGAGAAGGAAATCTTCTGGCTCATTTAGTGATAATAGGTTACAAATTATCTCACCAACAGGGGCCACTTGTCGAGTATGATTTTATGGTCAGAGATTTATTTGTAGATCTCCAAGATGGAGTAAAGCTCTGTAGAGCTGTACAGCTCTTGCAGCATGATTCTTCTATCCTCACGAAAATTATAGTTCCCTCAGATACTTACAAGAAGAATTTGGCCAACGGTGGCCTTGCCCTGCAATACCTTAAGCAAGCTGGTGTATTGCTACATGATGAGGATAACATGATGATTTTAGCGGAGGATGTTGCCAATGGAGACAAGGAACTTGTTCTCTCGTTGCTGTGGAATATCTTTGTTCACTTGCAGCTACCTCTTCTGGTTCACAAATCAAGTATACTAGAGGAAATCGGTAAAATTCGTGGACTTCGTGTGGATGCCATTAACAATGCAAATTCAAGTTCACTGGAATTGCTTTTGAATTGGATTCAGGCAGTCTGTGAAAATTATGATTGTGGGATTGGCAGTTTTGATTCATTGGTTGATGGAAAAGCTATCTGGTGCTTACTTGATTATTATTTCCAGAAAGAACTTCATGGTTCCTGCTTACTGAAGGAAGTCAATACAATAAGTGGCAAGGAATCAATAATGTCTGTCGATGATTATTCAGATGCAGTGTACAATTTTATATTATCACAGAGGCTGACAACATTATTAGGAAATTTTCCGGAGGTACTTCAAATAAGCGACCTACTTGAATATAATGGTGCTTCCAGTGATCGAAGTGTAGTGATATTGTTGGTTTTCCTTGCAAGGCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTCGGTTGTGATTGCCAAAGTCTGTACCGGAAACATTTGAGGATGGAGCAATGTCTTTTTAATTCTGAAGCATTACAAAAGTCGGGCGCTTCTGAAGTGCATGACAACGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGTCTTGGTGGCAAGATATGGCTGAAAGAAATCAGAAATCTTGTATGAAACCGGCTGCGTGCAGACCCATAGAAAGCAGCGCCAACATCAGAAGAGAAAACGCTGCAATAACAATACAATCACATTTCAAAAGATTGGTTGCTCGTCGCATGTTTCTCAAAGTGAATAATGCTGTCTCTCTTTTGCAAACTGTTTTCCGAGCTTGGCTAGTAGTGAGGCAGGAGTGTTCGTTCACCTATGTCCAAGGTCAAAGTTTTTCATGTGCAATAAGCAAGAGGTCAGGAACATATAAGAGATATGCCATGTTTTTCGTTCAAAGGCACTCTTTTTTGAAGTTAAAGAGGTCCGCATTACTTATCCAGCGAGCAGTAAGGAGTTGTCTATCTTGGAGGCACCAGCAGGGATGTAGTATACTTCCTTATCCGACGGCTTCAGATCCAATGGTTGCTGCCACTATTGTTCAGAAATTTGTTCGTGGCTGGATGGCACGATCTAGATATAATCATATGCTTGATCAGCAAGAGAAATCTTCATATTTGTACTCACAAATGGTTATGTTTGAACTTCAAACAAAAGCTGCCATAAAGATTCAGCTTACTTGGAAGAGGTATATGTGCCGCAAGTCTACTCAGAGGCACTTCTATGCGACAATAATTCAAAGCAATTTTCGAAGGTGGCGGTTAAGGAGAATATATATGAATCAGATTCAAGCTGTTTTGAGAATCCAATGTTGTTTCCGAATGTCAGTTAGTGTAAAGACATTTCGACACTTCAAAACGGCATTTAAGGCAGCCGTTGTCATTCAGTCTTTCACACTTGCATGGATTGCACGGAAGGTAGCTTATGCACGTAGAAGTCGCATCATTTCAATTCAAAGGCATTGCCGCACTTGGCTGGCGAGAAGGGACTTCATACGCCAAAGAGGTGCTGCATTGAAGATTCAAAGCGTCATTCTTAGTCTGAAATACCAGAAGGCTCTCAATTGTCAGAAAGATGCAGTTTTGCACATTCAGCGTTTTGTTAGAGGGCATTTATCACGAAATAGGCTCTTAGGAGGTGCATCTCGGCAACGCGCAATGATTCCAAGGGGTTGGATTTTAAGACCAGTTGGTTACTCTAGTTTTCAACTGGAACAATTTTTGTGTTCTGTTCTGAAATTGCAGCGATGGTGGAAAGGTGTCTTGTCACACAAGTTAAGAACAAAGTCTGTGATTATAATTCAGTCTTGTACTCGTGGGTGGATTGCTAGGCGAATGGCAACTGTTCGCAAACACCATGTTGTTGTCATTCAAAGGCATTGCCGCACTTGGCTGGCGAGAAGGGACTTCAAGCGCCAAAGAGGCGCAGCAATGAAGATCCAAAGCGTCATTTTTAGCCTGAAATACCAGAAGGCTCTCAATTGTCAGAAAGATGCAGTCTTGCAGATTCAGCGTTTTATTAGGGGGCATTTATCACGAAATAGGCTTTTAGGGGGTGCATCTGGGGAACGCGCAATGATTCTAAGTGGTTGCATTTTAAGATCAGGTTACTCTAGTTTTCAACTGGAACTATTTTTGTGTTCTGTTCTAAAATTGCAGCGATGGTGGAAAGGTGTCTTGTCACACAAGTTAAGAACAAAGTCTGTGATTATAATTCAGTCTTGTACTCGTGGGTGGATTGCTAGGCGAAAGGCAACTCTTCGCAGGCATCATTTTGTGGTCATTCAATCCCACTGGAAAGGTTACCTTGCTCGGAAAGAGTCAAAAGAGCAGCTGCTAGACTTGCGCCTGAGAGTGAAGAAATCTGCCAGAAATGTGGACGATAGCAAGCGTCTCATAAACAGACTTCTCGTAGCGCTTTCAGAGCTACTTCACATGAAGAGTGTCAGTGGCATCCTTCACACTTGTGCGACATTGGATATGGCTACAGAACATTCTCAGAGATGTTGTGAAGAGCTTGTCGCTGCAGGGGCTATTGACAAGTTGTTAACGCTTATTCGTTCAGTGAGCCGAAGCATACCTGATCAGGAGGTTCTTAAGCATGCTATGTCAACTCTCCGAAATCTAGCTCGCTACCCTCACCTACTTGAATTACTGATTCAAAGCAACGGTTCTATACAGACGATTCTCTGGGAACTACTGAGGAACAAGGAGGACAGTTTCTTCATTACTTCTGAACTTCTGATGAAGATATCTTCAACTCCTAATGGTGTTGAATCCTTACGCAAGCTACCTGCTCTTGTAAAAAGACTGCATGCTCTTGTCGAGGAGCTTACACGGAAGGCAATCTATGAGAAAAGAAATGGCAGAGCTGCTAGTGCTGTAATAAGAGAGGATAGAGAAAGGAGATTGAAGGAGGCTGCTGTGATTCTCAAACTGATAACAAGTGCCTGA | 4563 | 0.4238 | MDGDEPPCPSPYVSSSSIFKDISNFKTPKRPSYSFQSPCEKFFTASKQTPHSSAFRRRPSIAPPSSARTKKSTAAARKLKAFELEQSQSSRKAQLKKEQSLKSLAKSITVWLNFLFENPARCGCNWSIGGVRIGDKQSEVEATKGKRDSGPGISIGVDKAWRTPKRQRKMWSRAEERVDNENPLLELPNSMFPYLRESLEDVCSFEDLKQRMRVYLNLGSCKEIFQVMNQVTKNIDEGRLKLKPHCPIVTDLGLKNKATRILLCYNPIWLRIGLYIIFGGDSLVPNGDDDSEQEITFLKMVIDKQFFSHAGLAKAYAYNKMVDGLYRPGYYENLGNVILKRILLLVLTLDRIKSQSSLSLKYGIDGLDGGSPLLFKADSWIKSSGQVISEFLSSEVTHGEGNLLAHLVIIGYKLSHQQGPLVEYDFMVRDLFVDLQDGVKLCRAVQLLQHDSSILTKIIVPSDTYKKNLANGGLALQYLKQAGVLLHDEDNMMILAEDVANGDKELVLSLLWNIFVHLQLPLLVHKSSILEEIGKIRGLRVDAINNANSSSLELLLNWIQAVCENYDCGIGSFDSLVDGKAIWCLLDYYFQKELHGSCLLKEVNTISGKESIMSVDDYSDAVYNFILSQRLTTLLGNFPEVLQISDLLEYNGASSDRSVVILLVFLARQLFVKKNVDQLNFHKLLGCDCQSLYRKHLRMEQCLFNSEALQKSGASEVHDNEDAARKFKAIQSWWQDMAERNQKSCMKPAACRPIESSANIRRENAAITIQSHFKRLVARRMFLKVNNAVSLLQTVFRAWLVVRQECSFTYVQGQSFSCAISKRSGTYKRYAMFFVQRHSFLKLKRSALLIQRAVRSCLSWRHQQGCSILPYPTASDPMVAATIVQKFVRGWMARSRYNHMLDQQEKSSYLYSQMVMFELQTKAAIKIQLTWKRYMCRKSTQRHFYATIIQSNFRRWRLRRIYMNQIQAVLRIQCCFRMSVSVKTFRHFKTAFKAAVVIQSFTLAWIARKVAYARRSRIISIQRHCRTWLARRDFIRQRGAALKIQSVILSLKYQKALNCQKDAVLHIQRFVRGHLSRNRLLGGASRQRAMIPRGWILRPVGYSSFQLEQFLCSVLKLQRWWKGVLSHKLRTKSVIIIQSCTRGWIARRMATVRKHHVVVIQRHCRTWLARRDFKRQRGAAMKIQSVIFSLKYQKALNCQKDAVLQIQRFIRGHLSRNRLLGGASGERAMILSGCILRSGYSSFQLELFLCSVLKLQRWWKGVLSHKLRTKSVIIIQSCTRGWIARRKATLRRHHFVVIQSHWKGYLARKESKEQLLDLRLRVKKSARNVDDSKRLINRLLVALSELLHMKSVSGILHTCATLDMATEHSQRCCEELVAAGAIDKLLTLIRSVSRSIPDQEVLKHAMSTLRNLARYPHLLELLIQSNGSIQTILWELLRNKEDSFFITSELLMKISSTPNGVESLRKLPALVKRLHALVEELTRKAIYEKRNGRAASAVIREDRERRLKEAAVILKLITSA | 1520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco03g1936 | 1520 | MobiDBLite | consensus disorder prediction | 45 | 71 | - | - | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1060 | 1089 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 920 | 947 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1153 | 1182 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Gene3D | - | 1266 | 1315 | - | - | |
| Acco03g1936 | 1520 | Gene3D | - | 1128 | 1178 | - | - | |
| Acco03g1936 | 1520 | Gene3D | - | 942 | 992 | - | - | |
| Acco03g1936 | 1520 | Gene3D | - | 761 | 809 | - | - | |
| Acco03g1936 | 1520 | Gene3D | - | 1035 | 1091 | - | - | |
| Acco03g1936 | 1520 | CDD | CH_ASPM_rpt1 | 403 | 514 | - | - | |
| Acco03g1936 | 1520 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1251 | 1314 | IPR027417 | - | |
| Acco03g1936 | 1520 | SUPERFAMILY | Calponin-homology domain, CH-domain | 319 | 595 | IPR036872 | - | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1199 | 1228 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1268 | 1295 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | Calponin homology (CH) domain | 428 | 518 | IPR001715 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 880 | 906 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Gene3D | - | 413 | 519 | IPR036872 | - | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1157 | 1174 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 921 | 939 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 880 | 897 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 946 | 962 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1131 | 1148 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1201 | 1219 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 764 | 780 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1269 | 1287 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1062 | 1080 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1016 | 1034 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Pfam | IQ calmodulin-binding motif | 1296 | 1310 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | Gene3D | - | 879 | 940 | - | - | |
| Acco03g1936 | 1520 | PANTHER | UNCHARACTERIZED | 32 | 864 | - | - | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1014 | 1043 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 762 | 790 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 1380 | 1427 | IPR000225 | GO:0005515 | |
| Acco03g1936 | 1520 | SUPERFAMILY | ARM repeat | 1338 | 1480 | IPR016024 | - | |
| Acco03g1936 | 1520 | SMART | arm_5 | 1369 | 1414 | IPR000225 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1291 | 1319 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | ProSiteProfiles | Calponin homology (CH) domain profile. | 400 | 519 | IPR001715 | GO:0005515 | |
| Acco03g1936 | 1520 | Gene3D | - | 1326 | 1492 | IPR011989 | - | |
| Acco03g1936 | 1520 | ProSiteProfiles | IQ motif profile. | 1130 | 1157 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 919 | 941 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 876 | 898 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1290 | 1312 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1267 | 1289 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1059 | 1081 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 784 | 806 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1129 | 1151 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 964 | 986 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1198 | 1220 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1152 | 1174 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 946 | 963 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 761 | 783 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1013 | 1035 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 1036 | 1058 | IPR000048 | GO:0005515 | |
| Acco03g1936 | 1520 | SMART | iq_5 | 990 | 1012 | IPR000048 | GO:0005515 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco03g1936 | 1014 | 1184 | Myosins gene family | AT1G04160 | 25.967 | 2.15e-06 | 50.8 |