Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1912 ATGGCGATGCTGCAGAAGAAGATGAAGAAGACTCTCTTTTCCATTCCTCCTCCTCCTCCTCCTAGCAGTGTCGATAATAGCGGCGTCTCTGAACCATCTCCGGTGAGACTTGGAAACTGGGGTCCCAATAATGCTGCATCGCTATCGCCGGAGATAAGCCAGAATTGGCCGGCGACTAGGCCCTATGTTCGATCCAGGTTGCCTCGCCTTCGCTGGACACCGGATCTTCATGAACGTTTTTTGCATGCAGTTAAGAGTCTTGGTGGAGTACACAGGGCAACACCAAAGTCTGTTTGGGAGTTGATGAATCTGAATGGACTCACTGTCTCTCATGTTAAGAGCCACCTTCAGATGTGCAGGAGCAAGAAGCATAAGAGTGAAGTCATGATGCCTTTAGAGGTTTTCAACATGAAATCAAACAGGCGTGCAACTTGCTTGCATGTGCACATGTGCATGCATGCACCGCACACATATACATGGAATGTTGGTAGTGACAGAGAACACGTGTGTGCGCGTGAAATGGAAGGAACAGAGAGGAGAAGATTGGCAGAAGAAGCGTTATATGGACAACAGAATGTTGCTAATGACGAACAACCAAATGAAGAATCCATCAACCTCGGAATTCTGGAACAGAACCACCCAACTTATCATCACATGAATCAGCATCCGCATCCTGAAATCCAACCACAGAATCAGGGGAGTGCGTCGCTAGTTTCCGAGAGCGTGCAACACAAGACCCATCCCTCCTACATCGTCTTCAACGGTCTATTCAAGACCCTTCATCCCCAAGAGACGAACGATGCTGCAGAAAAGGTGGTGCCTTATCAAAGCCAACTTGAAAATACCAGTGAGATGTCATCATCATCAAGAGGTTTGTTTCAGCCGTATAATAATAAAAACGACGACGTCTCACTTGAGCTCACTCTGGCTCTGCCTGCTGCTCCTAGCTGTTCAGCTGTCAATTTGTTTGACCTTAATTATATGTACAAGCCTTGA 996 0.4719 MAMLQKKMKKTLFSIPPPPPPSSVDNSGVSEPSPVRLGNWGPNNAASLSPEISQNWPATRPYVRSRLPRLRWTPDLHERFLHAVKSLGGVHRATPKSVWELMNLNGLTVSHVKSHLQMCRSKKHKSEVMMPLEVFNMKSNRRATCLHVHMCMHAPHTYTWNVGSDREHVCAREMEGTERRRLAEEALYGQQNVANDEQPNEESINLGILEQNHPTYHHMNQHPHPEIQPQNQGSASLVSESVQHKTHPSYIVFNGLFKTLHPQETNDAAEKVVPYQSQLENTSEMSSSSRGLFQPYNNKNDDVSLELTLALPAAPSCSAVNLFDLNYMYKP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1912 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 57 195 IPR046955 GO:0003700
Acco03g1912 331 Gene3D - 67 125 - -
Acco03g1912 331 SUPERFAMILY Homeodomain-like 66 123 IPR009057 -
Acco03g1912 331 MobiDBLite consensus disorder prediction 8 33 - -
Acco03g1912 331 Pfam Myb-like DNA-binding domain 70 118 IPR001005 -
Acco03g1912 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 124 IPR017930 -
Acco03g1912 331 NCBIfam myb-like DNA-binding domain, SHAQKYF class 68 123 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1912 Acco-ChrAcco03 44946000 44949261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1912 59 123 G2-like Transcription Factor Family AT2G42660 67.692 1.36e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco03g1912 Myb_DNA-binding 1.2e-06 CL0123