Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1897 ATGGAGTGGACTAGGGGCCGCACTATCGGCATGGGTTCCACCGCCACCGTGTCGGTTGCTGAGTGTCGTCGGTCTAGTAGGATGTTTGCGGTGAAATCGGTGGAGCTTCAACGGTCGGAATTGCTCAGGAGAGAACAGAGCATTCTCTCCACATTGGAGTGTCCCCATGTTGTGGCATATGAAGGCTGTGACACCACATTTGAAAATGGTGTGTTCATGTATAACTTGTTCATGGAGTACGCGCCTTACGGGTCAATCGCCGACGGAATTCGCGAGCGTGACGGTGGGTTGGATGAGGTTATGGTTGGACGTTATGCTCGTCAGATTCTGCTTGGGTTGAATTACTTACATTCCAATGGGATAGTGCATTGTGATTTGAAAGGCCAGAATGTTTTGATTACCGATGAAGGGGCTAAAATTGCTGACTTGGGTTGTGCCCGGAGAGTTACGGCGGTGCCGGATTATGATGGGGTGATTGCCGGTACTCCGGCATTCATGGCACCGGAGGTGGCGCGTGGGGATGAGCAGGGGTTCCCTGCTGATGTGTGGGCTCTTGGCTGTACTGTGCTAGAGATGATCACAGGAAAAGCGCCATGGCATGACGTTTCCAACCCGTTGAGTGTTCTCTATCGGGTCGGGTTCTCCGGTGAGCTGCCGGAGATCCCGAATGTCTTGTCGGGGCAAGGGAAGGATTTTGTCACCATGTGTTTGAAAACAGATCCGAACGAGAGGTGGTCAGCAAGTGAGCTTCTCAAACATGAGTTCGTTCAGGATTCAAGCAATGAGTCGAAGAAATTTGATGATTCTGGTTCAAATTCTCCAACTAGTGTGTTGTTGGATCGAGATTTCTGGTACTCGTTTGACGGGTCTCAGAAAACCCAAACACTGAATCCGAACCCAAACCCGACCAATGATCATATGTTTTCTTGCCCCAAAAGTAGAATTGGTAGGTTGTCTTCCTCTATGCCCAATTGGGAATGTGAGGACGAATGGATCACAGTAAGAGAAATAAGCAACAGAGAGTCAGGGAGATTCTTCAATGGCAGAGAATCTAATGAAGAAACACAGAATTATGGATTAGACAGTTCAAATTACATCAGGGAGGACAATTATTTGGTTGTTACTAATGAACCCAGAACAGTTAGTATAGTTGGATTGAGCGAGTGTTGTAATATTGATGATGATTGTTGTATCAGAGAATCTATATTCATATGTTCACAATGTAAAAATATGGCTCTCAGTAGAAATATTTTGCATGACTTGCTTTCAGCTTTCCCTTTAATCCCTACTACTTTTGAAACGTAG 1305 0.4644 MEWTRGRTIGMGSTATVSVAECRRSSRMFAVKSVELQRSELLRREQSILSTLECPHVVAYEGCDTTFENGVFMYNLFMEYAPYGSIADGIRERDGGLDEVMVGRYARQILLGLNYLHSNGIVHCDLKGQNVLITDEGAKIADLGCARRVTAVPDYDGVIAGTPAFMAPEVARGDEQGFPADVWALGCTVLEMITGKAPWHDVSNPLSVLYRVGFSGELPEIPNVLSGQGKDFVTMCLKTDPNERWSASELLKHEFVQDSSNESKKFDDSGSNSPTSVLLDRDFWYSFDGSQKTQTLNPNPNPTNDHMFSCPKSRIGRLSSSMPNWECEDEWITVREISNRESGRFFNGRESNEETQNYGLDSSNYIREDNYLVVTNEPRTVSIVGLSECCNIDDDCCIRESIFICSQCKNMALSRNILHDLLSAFPLIPTTFET 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1897 434 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1897 434 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1897 434 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Acco03g1897 434 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Acco03g1897 434 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 353 - -
Acco03g1897 434 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1897 434 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Acco03g1897 434 CDD STKc_MAPKKK 2 256 - -
Acco03g1897 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1897 Acco-ChrAcco03 44809227 44810531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1897 1 335 MAP Kinase Kinase Kinase AT2G32510 48.424 9.79e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1897 Pkinase 2.5e-52 CL0016