Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1895 ATGTTTGATTATGGCGCCGCACAATTCGGGGCGGTGCACTTCATCTCTGCGAAGAAGCAGTCAAACTCTTTTCTTCACGAAACCTCCTTCCTCCCTCCCCTCCCATTCCCTTCTTCTTTTCAACCTCTGACGCACCCTCTGACGTTTTTCCTTTCTCCCTCCTTCTTTTATAACCCTCTCTTCCTTCACACTTCTGAAGACTTCTCTCTCACTCTCGCTCCCTCTTTCTCTCCTCTTCCTCTTTCTTCTTCTTCTCTGCCCCAAATGATGCGTCTCGCTCTCGACTCTTCTCACGCCCACGCCATGCTTCCTTCCTTAGGCTTCCCCGTCAATCTCTCCCGTCCCTCCGCCGAGCTCGACTTCTTCTCCGATCGCAACCACCCTCCGCCTCTTAAACCTGTCAAGAACGAGATTCCGACCCCCGATGTCAACACTGGCCTGCAACTCCTTACTGCTCATACTGGCAGCGATCAGTCCACCGTCGACGACGGAGTTTCATCTGACGCTGAAATCAAGCGAGCCAAGAGCTCTACCGAGTTGGCGCAACTGCAAGAGGAGCTCCAGCGTATGAATGCGGAAAACGTGAAGCTGAGGGACATGTTGAGCCATGTGAACGATAATTACACGGCTCTGCAAATGCATCTCGTTACGTTAATGCAACAGCAGCAACACCAACAGATTCAACGTACCCAGAGCACAGCAAATGAGGTTGTTCGATCAAAACCTGATGACAAAAGAGAAATTGTACCCATGCGGCTTCTGGAATTGAGGCCGAGTAGCGGAACGGCTGAGGTAGATAATAACGAGGTGTCCAATTCAACTTCCGATGAAAGAACACGATCCACCACTCCTCCTCTTAACACCAACAGTGGTAAAAATAATGAAAGAGAAGAGAGTCCAGACTCAGATGGTCACCCACATGGGTGGGGCAATAATGGTCCTAACAAGCTTCAGAAGCTGAACCCCTCATCATCAAACTCCGCCGACCCATCAACCGGTAGCGCCGCTGCAGAAGCCACCATGAGAAAAGCTCGCGTCTCAGTTCGTGCCAGATCTGAAGCACCCATGATCAGTGATGGGTGTCAATGGCGAAAATACGGACAGAAAATGGCGAAGGGAAACCCTTGTCCTCGTGCTTACTATAGATGCACCATGGCCGTCGGTTGCCCAGTTCGAAAACAAGTACAACGTTGCGCGGAGGACAGGACGATTTTGATAACTACCTACGAAGGAAGCCATAACCATCCGCTGCCACCCGCTGCGATGGCGATGGCATCAACGACGACGGCAGCTGCGAGCATGTTGTTGTCAGGTTCAATGTCAAGTGCAGACGGGATAATGAATCCGAATTTGCTTGCCAGAGCTATTCTTCCTTGTTCGTCTACCATGGCTACACTTTCTGCTTCAGCTCCATTTCCTACTATAACATTGGACCTCACTCACAATTCAAACAGTACCATGAACAATCCTATGCAATTCCAGAGACCGCCATTTCAAGTACCTAATTTCCCAGGGCAGCCTCAAGTTCAACCAACCGGGTCAAGTCAGCATCATCAGTTGGCTCAAGCATTTTCACAAGCACTTTACAATCAATCCAAGTTCTCTGGCCTTCACTTGTCTCATGATATGGGTTCGTCCTCTTCATCTTCTTCCCAATTAGCCCACCAACCCCCTAGACCGGTGCAGCCAAACCAGCCACCACCGCCGATGTCATCGTTGGCAGATACTGTCAGCGCCGCCACTGCGGCCATCACCGTCGACCCGAATTTCACAGCGGCGCTCGCTGCCGCCATCTCCTCCATCATTAATAGCGGCGGTGTTCCCTCTGTCAACAACAACAACACCAGCAGCGGCAATCCCAACATCACCGGTGGTACCTCAATCAGTAGTTTCTCAGGGAATCAATAA 1908 0.5089 MFDYGAAQFGAVHFISAKKQSNSFLHETSFLPPLPFPSSFQPLTHPLTFFLSPSFFYNPLFLHTSEDFSLTLAPSFSPLPLSSSSLPQMMRLALDSSHAHAMLPSLGFPVNLSRPSAELDFFSDRNHPPPLKPVKNEIPTPDVNTGLQLLTAHTGSDQSTVDDGVSSDAEIKRAKSSTELAQLQEELQRMNAENVKLRDMLSHVNDNYTALQMHLVTLMQQQQHQQIQRTQSTANEVVRSKPDDKREIVPMRLLELRPSSGTAEVDNNEVSNSTSDERTRSTTPPLNTNSGKNNEREESPDSDGHPHGWGNNGPNKLQKLNPSSSNSADPSTGSAAAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSSTMATLSASAPFPTITLDLTHNSNSTMNNPMQFQRPPFQVPNFPGQPQVQPTGSSQHHQLAQAFSQALYNQSKFSGLHLSHDMGSSSSSSSQLAHQPPRPVQPNQPPPPMSSLADTVSAATAAITVDPNFTAALAAAISSIINSGGVPSVNNNNTSSGNPNITGGTSISSFSGNQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1895 635 MobiDBLite consensus disorder prediction 238 252 - -
Acco03g1895 635 MobiDBLite consensus disorder prediction 539 575 - -
Acco03g1895 635 SMART WRKY_cls 357 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g1895 635 MobiDBLite consensus disorder prediction 539 558 - -
Acco03g1895 635 MobiDBLite consensus disorder prediction 314 334 - -
Acco03g1895 635 MobiDBLite consensus disorder prediction 483 519 - -
Acco03g1895 635 MobiDBLite consensus disorder prediction 224 351 - -
Acco03g1895 635 Gene3D WRKY domain 342 419 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g1895 635 Coils Coil 166 207 - -
Acco03g1895 635 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 152 615 IPR044810 GO:0003700
Acco03g1895 635 MobiDBLite consensus disorder prediction 505 519 - -
Acco03g1895 635 SUPERFAMILY WRKY DNA-binding domain 350 418 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g1895 635 MobiDBLite consensus disorder prediction 261 293 - -
Acco03g1895 635 MobiDBLite consensus disorder prediction 612 635 - -
Acco03g1895 635 FunFam probable WRKY transcription factor 31 342 419 - -
Acco03g1895 635 ProSiteProfiles WRKY domain profile. 352 418 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g1895 635 Pfam WRKY DNA -binding domain 359 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1895 Acco-ChrAcco03 44776794 44779632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1895 117 603 WRKY Transcription Factor Family AT1G62300 52.907 3.95e-142 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g1895 WRKY 6.9e-24 CL0274