Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1882 ATGGCCACACAACGAAACCCAACCCTGCTCTTGTTCTTTCTTCTCTGTCAGTCATGCATATTCAAAATCAAAGCCGAGTGCAGGCCCAAGCATGGCTGCGACCTAGCTTTAGCTTCCTACGGCATTATTGATGGAGAAAAAACCAACCTCATTCGAATCAGCCAACTCTTCAATCAGACAATTCCAGACATGCTCAAATTCAATCCCAATTTCCCAAACCCTAATAACAATACGACGACCCTCCCAACCCATATCCGACTGCGCGTGCCCTTCACGTGCCGCTGCTTGAACCAAGATTTCTTAGCTCACACCTTCTCTTACACAATGCAGTACGGCGATACCTACGTGTCGATTGCTCATAAGACTTTCGCTGGTCTCACCGATGAGCAGTGGTTGAACCGATTCAACCTTCTCAATCCTTATAAGATCCCCAGTGGGAGTCGGGTCAATGTTACTGTTAATTGCTCCTGTGGTGATGCGCATGTGTCCACCGATTACGGGCTGTTCTTGACGTATCCAATTTTTCCGGGCGAGGGGTTGGCGGAGGTTGCGGCGGAGAATGGTGTTCCGGCCGAGTTGCTTCAGAGGTACAATCCTGAGTCCGATTTCAGCGCCGGCCACCTGGTGTTTGTGCCGGCTAGAGATGAAAATGGAAACTATCCACCATTGAAGTTGAGGCAAGTTGTTTTATACTACCGACTGCTCAAATCCTCTAACTTCGACACCTATCTATGTCTGTTATTTTATACCATTTGCAGATCAGGATTTTCTGGTGGAGCTATTGCTGGTATAGTTGTTGGAAGCATTTCTGGGATCTTGCTCTTGGGACTACTATATTTCGGGCTATGTAGAAGAAGTAGAGTGCAAGATGTATCCCTTTTCACAAATCCACTAGCATTTGAAGGTTCTGGAAGCAGCCCAGAGAAGCTATCAGAATTGGTGGCTGGTGTTGCTTCTCCTAGATTGTCAGGTATTACAGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTTGCTGAAGCTACCGATGGCTTTAGTATGGCTAATATGATCGGACAAGGAGGCTTTGGCTCTGTTTACTTTGCAAAACTTCGAAATGAGAAAGTTGCGATTAAGAAGATGGATATGCAAGCATCAAAAGAATTCCGTACTGAACTGAAGGTTCTTACCCATGTCCATCACCTAAACTTGAACTCCTTATTTTTGGTCTATGAGTACATTGAGAATGGCAATCTAAGCCAACATTTACGTGGCTCAGAGAGGGAGCCATTAACATGGCCATGTAGAGTGCAAATAGCCTTGGATGCAGCAAGAGGACTAGCATACATCCATGAGCAAACAGTTCCTGTGTACATCCATGGAGACATTAAATCTCCAAACATATTGATTGACGAAAATTTTCGAGGAAAGGTTGCAGATTTTGGTCAGACACATTTGACAGAATCTGGAAGTTCTTCAATGCCATCACTTCTTGTGGGCACTTTTGGCTATATGCCTCCAGAATATGTGAAATATGGCGACTTTTCCCTCAAAACAGATGTATATGCATTTGGAGTTGTTCTCTATGAACTCATATCCGCAAAAGAAGCTATTGTGAAGACAAAAGAGCTTGCGAATGAATCAAAGGGACTAGTTGCCTTGTTTGGAGAGGTTCTGAATCAGCAAAACCCAGAAGAAGACCTTCGTCAACTTGTTGACCCCAGGCTCGGTGACAACTACCCTCTTGACTCAGTATATAAGATGTGTCAGCTAGCGAAAGCTTGCACACAGGAAAATCCACAAGTAAGGCCAAGCATGAGATCAATTGTAGTTGCATTGATGGTACTTTCGTCTCCAAGAGAGGACTGGGATGTGGGTTACTTCTATGCAAACCAAGCTCTCATTCATCTCATGGCAGAGAAAGCTAACTTGTGCAGATGA 1920 0.4474 MATQRNPTLLLFFLLCQSCIFKIKAECRPKHGCDLALASYGIIDGEKTNLIRISQLFNQTIPDMLKFNPNFPNPNNNTTTLPTHIRLRVPFTCRCLNQDFLAHTFSYTMQYGDTYVSIAHKTFAGLTDEQWLNRFNLLNPYKIPSGSRVNVTVNCSCGDAHVSTDYGLFLTYPIFPGEGLAEVAAENGVPAELLQRYNPESDFSAGHLVFVPARDENGNYPPLKLRQVVLYYRLLKSSNFDTYLCLLFYTICRSGFSGGAIAGIVVGSISGILLLGLLYFGLCRRSRVQDVSLFTNPLAFEGSGSSPEKLSELVAGVASPRLSGITVDKSVEFSYEELAEATDGFSMANMIGQGGFGSVYFAKLRNEKVAIKKMDMQASKEFRTELKVLTHVHHLNLNSLFLVYEYIENGNLSQHLRGSEREPLTWPCRVQIALDAARGLAYIHEQTVPVYIHGDIKSPNILIDENFRGKVADFGQTHLTESGSSSMPSLLVGTFGYMPPEYVKYGDFSLKTDVYAFGVVLYELISAKEAIVKTKELANESKGLVALFGEVLNQQNPEEDLRQLVDPRLGDNYPLDSVYKMCQLAKACTQENPQVRPSMRSIVVALMVLSSPREDWDVGYFYANQALIHLMAEKANLCR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1882 639 FunFam PTI1-like tyrosine-protein kinase 3 407 620 - -
Acco03g1882 639 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Acco03g1882 639 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 11 619 IPR044812 GO:0019199|GO:0045087
Acco03g1882 639 SUPERFAMILY Protein kinase-like (PK-like) 323 607 IPR011009 -
Acco03g1882 639 ProSiteProfiles Protein kinase domain profile. 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1882 639 SMART serkin_6 345 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1882 639 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Acco03g1882 639 Pfam Protein tyrosine and serine/threonine kinase 347 605 IPR001245 GO:0004672|GO:0006468
Acco03g1882 639 ProSiteProfiles LysM domain profile. 105 151 IPR018392 -
Acco03g1882 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Acco03g1882 639 Gene3D Phosphorylase Kinase; domain 1 319 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1882 Acco-ChrAcco03 44619677 44629141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1882 7 634 Receptor kinase-like Gene Family AT3G21630 50.233 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco03g1882 PK_Tyr_Ser-Thr 2e-37 CL0016