Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1866 ATGAGTCAACTCGGGGTAATATTGCAGGAATCTCTTCAGAGAGAACGTGAGGAAAGAACGATTCTGGGATTGTTGACGGATCAGATGGATTCTGTGAATAGGCATAATCATAGTGATAGAGAGCCTCAGAGGAGGCGCAGTTTAAAAGAACGGCTAAGATTCACCGGAATGGGGTGTTGTGGGGCCACCTGGGGTTTCCGTCCGACGTCAGTACGGCACGATGAAGGAGGAGAGGAAGAAGAAGAAGAAGACGAACGGCGGCAGCAGCAGCAAAGGCTCCAAGAGCCGAATCCCGGTCAAAGATCGAGCTCGTCGGACCCGGATTGCTTGAGCCCGAACCCATCGGGTACAGGTATGAATCTTGCGGCGGCGTTGGCTGCGGAGCGTCAATTTCGGGGGGCGCAAGAGCCGGAGACTGAGAGACAAGTAACCGCCGGCGGGAACAATTTCCGGCGGGGAGGAGTAGGAGCAACGCCAGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTAGAGGAGGGCGAGGGAGGCGACGCGGAGGCGACGGTGACGGTGACGGAGAAGGAGAACGGAGGAGGAATGGGGAATGATACAGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGAGCAGCATTTATCCCATGTGGGCATACTTTTTGCAGAGTGTGCACCAGAGAGCTGTGGTTGAATCGAGGGACCTGTCCCCTCTGTAACCGTTCGATCCTCGAGATTCTCGACATCTTCTGA 747 0.5596 MSQLGVILQESLQREREERTILGLLTDQMDSVNRHNHSDREPQRRRSLKERLRFTGMGCCGATWGFRPTSVRHDEGGEEEEEEDERRQQQQRLQEPNPGQRSSSSDPDCLSPNPSGTGMNLAAALAAERQFRGAQEPETERQVTAGGNNFRRGGVGATPGTPWRVSLMRLLEEGEGGDAEATVTVTEKENGGGMGNDTVCCVCMGRKKGAAFIPCGHTFCRVCTRELWLNRGTCPLCNRSILEILDIF 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1866 248 MobiDBLite consensus disorder prediction 131 158 - -
Acco03g1866 248 SMART ring_2 200 237 IPR001841 -
Acco03g1866 248 Pfam Zinc finger, C3HC4 type (RING finger) 197 242 - -
Acco03g1866 248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 248 IPR013083 -
Acco03g1866 248 CDD RING-HC 200 237 - -
Acco03g1866 248 PANTHER OS01G0917900 PROTEIN 5 248 - -
Acco03g1866 248 MobiDBLite consensus disorder prediction 32 47 - -
Acco03g1866 248 ProSiteProfiles Zinc finger RING-type profile. 200 238 IPR001841 -
Acco03g1866 248 SUPERFAMILY RING/U-box 195 245 - -
Acco03g1866 248 MobiDBLite consensus disorder prediction 92 118 - -
Acco03g1866 248 MobiDBLite consensus disorder prediction 26 47 - -
Acco03g1866 248 MobiDBLite consensus disorder prediction 63 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1866 Acco-ChrAcco03 44318294 44319040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1866 29 248 C3H Transcription Factor Family AT4G22250 47.162 3.13e-54 172