Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1862 ATGGGGAAATCCGGGGGTAGAAAAAAGAAGGGTGGTTCAAATCAAGTTGTTGCTGATAATTCAGCTCCAAGTGCTAATGGTGGTGCGGATGTAGACTCTTCAATCTTTTTGAAAAGAGCCCTTGAGCTCAAGGAAGAAGGGAATAAGAGGTTCCAAAACAAGGATTACGCTGGTGCCCTTGAGCAATATGAGAATGCTCTTCGACTAACCCCGAAGAACCACCCTGAGAGAGCGGTCTTTCACAGCAACAGAGCAGCATGCTTGATGCAAATGAAGCCCATAGATTATGAAACTGTGATTGCTGAATGCACCATGGCATTGCAGGTTCAGCCCCAATATGTCCGGGCACTTCTTCGGAGGGCTCGGTCATTTGAGGCTATAGGGAAGTATGAAATGGCCATGCAGGATGTTCAAGGCTTACTGGCAGCCGACCCTAATCATCGGGATGCTCTGGAGATTGCCCAGAGACTGAAGACAGCACTTGGTCCTCGCCAGGAAGCCCAGCAGGATCTTCAGAGTCGGCCCTCCCCTGCGGCTCTTGGTGCCTCTGCAGTCCGTGGTGCCCCTATTGCTGGTCTAGGGCCATGTTTACCAGCCAGGCCAGCATCAAAGAAAGCTGCAAACTCAGTAGGTGGATTGGTAGCTCCTGCTAACAGTAAGCCAGAGAAGTCTCAACCAACTTTATTTACTGAAAATGGTCCTGAGACCAAGTCACAAATGCCAAAAATTGCTTTGAAGCCTTCAAATGCTTCAGCAAGATCAATGAACGCAAGAAAAGAAAACCACAATGAAATGTCATCGCATTCGTCAGTTATACATGGACAGCATTTAGAATTTGCGATTCGGTGGAGGCCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCCCAAATGCCAGTGAATTGCAATTTTAGAACTCTAAGGGATGTGGTGAGTAAAAGATTTCCTTCATCAAAGTCAGTTCTGATCAAGTATAAGGATAGCGATGGTGATTTGGTGACAATAACTTCTACTGATGAACTTAGACTGGCAGAATCTGGTGCTGATAGCTATCTTATAAAAGAGCCTGATGCAGATAAGAGTGATTCGGTTGGCACGTTGAGACTTCATATTGTTGAAGTTAGTCCTGAGCAGGAGCCTCCTTTACCAGAAGAAGAGGAAGTAAAACCTGTTGAGAGTGAAGGCATCAAGGGAGATGAGACTGGGTCACATACTTCCCAAAGTGAATCTGTCCCCGATGCTCCGGAGACTGAGGCTGATAAGATGGGGAAAGAAGCTCCCAAGGAGAAACCAGCAGCTACAGAAGATGCCGAATGCAAGGAAGTGGAGATGGATGATTGGTTGTTTGAGTTTGCTCAGCTCTTCCGCTCTCATGTGGGTATTGATCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAACTTTGTTCAGAGGCACTTGAGGAAACGGTAACTAGTGAGGAGGCTCAAGATCTCTTTGACAAGGCTGCTTCAAAGTTCCAGGAGGTAGCTGCTTTGGCATTCTTCAATTGGGGAAACATTCACATGTGTGCGGCTAGAAAACGAATTCCCTTAGATGAGTCAGGTGAGAAGGAAAAAGTGGCAGAACAGCTTCAGGTGGCTTATGACTGGGTCAAGGAAAAATATTCGTTGGCAAGAAAGAAGTATGAGGAAGCCCTTTTAATAAAACCTGACTTCTATGAGGGATTGCTAGCCCTGGGACAGCAACAATTTGAAATGGCCAAACTTAACTGGTCATTTGCACTTGCTAAGAAGATGGATTTATCAGCCTGGGATTCTTCAGAGACACTTCAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGGTGCAACTGAGATGTGGGAAAAGCTGGAGGAACAGAGGGCAAATGAACTAAAAGATCCTGGTGCAAGCAAGAAAGAGGAACTTGTGAGAAGAAGGAAAAAACAGGGAGGTGCTACTGAAGGTGAGACCTCTACGGTTGGTGGCCATGGTGAAATATCTGCAGAAGAAGCTGCCGAGCAAGCAGCTGTGATGAGATCACAGATTCACCTCTTCTGGGGGAATATGCTATTTGAAAGATCCCAAGTTGAATGCAAATTAGGGATGGGTGGTTGGAAGAAAAATCTGGATACAGCTGTGGAGCGTTTTAAACTTGCAGGAGCTTCTGAGGCTGACATTTCCTTGGTTCTGAAGAATCATTGCTCTAATGGGGATGCAAAGGAAGGAGATGAAAAGAAGATTCAAAACTCCCAACTCAGCAAGACTGATGAAACTGACAAGACCAGTGAGTGA 2301 0.4572 MGKSGGRKKKGGSNQVVADNSAPSANGGADVDSSIFLKRALELKEEGNKRFQNKDYAGALEQYENALRLTPKNHPERAVFHSNRAACLMQMKPIDYETVIAECTMALQVQPQYVRALLRRARSFEAIGKYEMAMQDVQGLLAADPNHRDALEIAQRLKTALGPRQEAQQDLQSRPSPAALGASAVRGAPIAGLGPCLPARPASKKAANSVGGLVAPANSKPEKSQPTLFTENGPETKSQMPKIALKPSNASARSMNARKENHNEMSSHSSVIHGQHLEFAIRWRPLKLVYDHDIRLAQMPVNCNFRTLRDVVSKRFPSSKSVLIKYKDSDGDLVTITSTDELRLAESGADSYLIKEPDADKSDSVGTLRLHIVEVSPEQEPPLPEEEEVKPVESEGIKGDETGSHTSQSESVPDAPETEADKMGKEAPKEKPAATEDAECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNIHMCAARKRIPLDESGEKEKVAEQLQVAYDWVKEKYSLARKKYEEALLIKPDFYEGLLALGQQQFEMAKLNWSFALAKKMDLSAWDSSETLQLFDSAEEKMKGATEMWEKLEEQRANELKDPGASKKEELVRRRKKQGGATEGETSTVGGHGEISAEEAAEQAAVMRSQIHLFWGNMLFERSQVECKLGMGGWKKNLDTAVERFKLAGASEADISLVLKNHCSNGDAKEGDEKKIQNSQLSKTDETDKTSE 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1862 766 SUPERFAMILY CAD & PB1 domains 280 353 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 14 28 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 739 766 - -
Acco03g1862 766 Coils Coil 609 629 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 738 766 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 629 669 - -
Acco03g1862 766 SUPERFAMILY TPR-like 489 586 IPR011990 GO:0005515
Acco03g1862 766 MobiDBLite consensus disorder prediction 220 256 - -
Acco03g1862 766 SMART PB1_new 283 375 IPR000270 GO:0005515
Acco03g1862 766 MobiDBLite consensus disorder prediction 383 400 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 629 655 - -
Acco03g1862 766 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Acco03g1862 766 CDD PB1 286 372 - -
Acco03g1862 766 SUPERFAMILY TPR-like 38 171 IPR011990 GO:0005515
Acco03g1862 766 SMART tpr_5 114 147 IPR019734 GO:0005515
Acco03g1862 766 SMART tpr_5 78 113 IPR019734 GO:0005515
Acco03g1862 766 SMART tpr_5 40 73 IPR019734 GO:0005515
Acco03g1862 766 PANTHER PROTEIN CLMP1 1 754 IPR044517 -
Acco03g1862 766 MobiDBLite consensus disorder prediction 210 257 - -
Acco03g1862 766 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Acco03g1862 766 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Acco03g1862 766 MobiDBLite consensus disorder prediction 374 440 - -
Acco03g1862 766 MobiDBLite consensus disorder prediction 415 439 - -
Acco03g1862 766 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
Acco03g1862 766 MobiDBLite consensus disorder prediction 1 30 - -
Acco03g1862 766 Gene3D - 285 353 - -
Acco03g1862 766 Gene3D Tetratricopeptide repeat domain 37 168 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1862 Acco-ChrAcco03 44272006 44274306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1862 44 158 Calmodulin-binding Proteins AT3G25230 31.746 4.53e-10 61.2