Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1861 ATGTCTATTGTTAAAGAAAGGTTACCACAGAAAGAAATTAGCTTCCTTTTTACGCTTTTTCCGATTGTTCGAGATTTTGGCGCCAAACTCATGACGTTGGATATCTCCAACGGCGAGTTTTGGCGCATGGCCAAAGAGGCTCTGGAATCCTTCACCGTGTGTTTTCTGCAGCAGAGGAATTCCGTCGAGAACGGAGGTGGTAAGGAGACCGGCGGGGAAGAGATGTTAGTGCCTCCCCTAAACTTCGGGATGGTCGATTATGGCATTTTTAGGTCTGGCTTTCCTGACTCGGCCAGCTTCGGATTCTTGAAAACCCTTCGCCTACGCTCCATTATATGTTTGTTCCCTGATGAGTATCCAGAAACCAATTTAAAGTTCTTGAAGGCTAATGGAATAAGGCTTTACAAATTTGGAATCGATGGCTCCAAGGTTGCTTCGACAAATGTCGCAGAAGATTCAATTCGCAAGGCACTGAAAGTTATCCTAGATGTTAGGAATCATCCACTACTTATTCATTGTAAAAGAGGGAAGCATCGTACTGGTTGTCTGGTGGGGTGTTTAAGAAGATTGCAAAGATGGTGCTTATCATCCATTCTTGATGAGTATCAAAGTTTTGCAGCTGCAAAAGCCAGAGTGTCAGATCAAAGTTTTATTGCAACGTTTGATATTTCTGGTTTTAAACCACAGCCAGTGTCATTTTCATCCTCACTAAAGTGA 717 0.431 MSIVKERLPQKEISFLFTLFPIVRDFGAKLMTLDISNGEFWRMAKEALESFTVCFLQQRNSVENGGGKETGGEEMLVPPLNFGMVDYGIFRSGFPDSASFGFLKTLRLRSIICLFPDEYPETNLKFLKANGIRLYKFGIDGSKVASTNVAEDSIRKALKVILDVRNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSILDEYQSFAAAKARVSDQSFIATFDISGFKPQPVSFSSSLK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1861 238 PANTHER TYROSINE-PROTEIN PHOSPHATASE 69 225 - -
Acco03g1861 238 ProSitePatterns Tyrosine specific protein phosphatases active site. 171 181 IPR016130 GO:0016311|GO:0016791
Acco03g1861 238 Pfam Tyrosine phosphatase family 76 231 IPR004861 -
Acco03g1861 238 FunFam probable tyrosine-protein phosphatase At1g05000 75 225 - -
Acco03g1861 238 CDD PFA-DSP_Siw14 75 222 - -
Acco03g1861 238 Gene3D Protein tyrosine phosphatase superfamily 75 225 IPR029021 -
Acco03g1861 238 PRINTS Plant and fungal dual specificity phosphatase signature 76 93 IPR020428 GO:0016791
Acco03g1861 238 PRINTS Plant and fungal dual specificity phosphatase signature 132 146 IPR020428 GO:0016791
Acco03g1861 238 PRINTS Plant and fungal dual specificity phosphatase signature 149 163 IPR020428 GO:0016791
Acco03g1861 238 PRINTS Plant and fungal dual specificity phosphatase signature 113 126 IPR020428 GO:0016791
Acco03g1861 238 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 75 222 IPR029021 -
Acco03g1861 238 ProSiteProfiles Dual specificity protein phosphatase domain profile. 81 238 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1861 Acco-ChrAcco03 44255215 44261536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1861 57 236 Protein tyrosine phosphatase (PTP) family AT4G03960 61.667 5.31e-80 237