Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1852 ATGGCGGGTTCCTGCTTCCACGCGCTTCGCCTACGAAGGTCGAAGAGCAAACCTATCGCGGAACGGTCTTCTTCGACGAGGACCAAGCTGAATTCTGACATGGAGAATATGGAGAGGAGGAGATTTGATAGTTTGGAATCATGGTCGATGATATTGGACTCTGAGAATGTGGAAACATGGGAGCCGTCTAAGGAGGATCGTCAAGAGGAATGGAACGCTGATCTTTCGCAGCTTTTCATAGGAAACAAGTTCGCTTCTGGTGCTTATAGTCGGATTTACCGCGGGATTTACAAGCAGAGAGCCGTGGCTGTGAAAATGGTGAGGGTTCCAGTACAGGACGAGGACAAAAGAGACGTGCTAGAGAAGCAATTTAAATCTGAAGTGGCTTTACTCTCACGTCTCTTTCATCCTAACATAGTGCAGTTTATTGCAGCTTGTAAAAAACCACCAGTGTACTGTATCATAACAGAATATATGTCGCAAGGAAATCTGAGGATGTATCTGAACAAGAAAGAGCCTTACTCTTTATCTACAGAAACAGTATTAAGGTTAGCTCTTGATATATCTAGGGGCATGGAGTACCTCCATTCGCAAGGTGTGATTCACAGAGATTTGAAATCAAATAACTTGCTTCTCAATGATGAGATGAGAGTTAAGGTGGCTGATTTTGGCACATCATGTCTTGAAACACAGTGTCGAGAGACCAAAGGAAATATGGGAACGTATCGTTGGATGGCACCAGAGATGATTAAGGGAAAACCTTACACTCGAAAAGTTGATGTTTATAGTTTTGGAATTGTGCTTTGGGAGCTCACAACCTCTCTACTTCCCTTTCAAGGAATGACCCCTGTGCAAGCTGCCTTTGCTGTGGCAGACAAGAATGAAAGGCCTCCATTACCAGCAAGCTGTCAACCGGCATTAGCACATCTGATAAAGCGATGCTGGTCAGCCAACCCTTCAAAGAGACCAGATTTCTGCGATATAGTGTCTGCTTTGGAGAAGTACGATGAGTGTGTGAAGGAGGGCCTACCTCTTACTCATCATTCGGGTCTTGTCTCTAAAAATGCCATTATTGAACGCTTAAAAGGTTGTGCTTCCATCATTTCCTCCTCTATACCTGTACATGCCTGA 1131 0.4447 MAGSCFHALRLRRSKSKPIAERSSSTRTKLNSDMENMERRRFDSLESWSMILDSENVETWEPSKEDRQEEWNADLSQLFIGNKFASGAYSRIYRGIYKQRAVAVKMVRVPVQDEDKRDVLEKQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPYSLSTETVLRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRETKGNMGTYRWMAPEMIKGKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVADKNERPPLPASCQPALAHLIKRCWSANPSKRPDFCDIVSALEKYDECVKEGLPLTHHSGLVSKNAIIERLKGCASIISSSIPVHA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1852 376 SUPERFAMILY Protein kinase-like (PK-like) 55 332 IPR011009 -
Acco03g1852 376 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Acco03g1852 376 PRINTS Tyrosine kinase catalytic domain signature 194 212 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 PRINTS Tyrosine kinase catalytic domain signature 156 169 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 PRINTS Tyrosine kinase catalytic domain signature 240 250 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 PRINTS Tyrosine kinase catalytic domain signature 259 281 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 PRINTS Tyrosine kinase catalytic domain signature 303 325 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 71 335 - -
Acco03g1852 376 SMART serkin_6 78 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1852 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Acco03g1852 376 ProSiteProfiles Protein kinase domain profile. 78 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1852 376 FunFam Serine/threonine-protein kinase isoform 1 68 160 - -
Acco03g1852 376 FunFam serine/threonine-protein kinase HT1 161 354 - -
Acco03g1852 376 Gene3D Transferase(Phosphotransferase) domain 1 161 349 - -
Acco03g1852 376 Coils Coil 20 40 - -
Acco03g1852 376 Pfam Protein tyrosine and serine/threonine kinase 80 332 IPR001245 GO:0004672|GO:0006468
Acco03g1852 376 CDD STKc_MAP3K-like 85 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1852 Acco-ChrAcco03 44186817 44191655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1852 1 366 MAP Kinase Kinase Kinase AT1G62400 81.383 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco03g1852 PK_Tyr_Ser-Thr 5.9e-67 CL0016