Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1794 ATGTTATTAGATGTGGAAGTGATGGGAAACAAGAAGAGGAGGAGGTGTGGGAGGGTTTTCAGATTCAAGAACTTTGGTGAGGAAGGATATCCTGTGGAGTTTAAAGGGCCATTTCGTGAGAACGTGAATGCTTTGCTTGAATTTGCCAATTGTGAGTCTAAATACTTAGGCTTTGGAATGCCCATTTGGTCTTTCCAACTTGAGGTTCATCGACACCCTCCTTCTCATGTCTTCTTGTTTGTCATTGAAGAAGCAATCACTGACACTTCTTTGAACCGCCATTGCAAGCATTGTCAATATGTAGGATTGGGGAATCATTTCATATGCAATAAGAAGTATCACTTTGTGCTGCCATCAAAGGAAACTTTGGCTGCGAGTCTGAGCTGTGAAGTGGCGTGTGAAGTAATTACAAATGGATCAGCCATAAGCAGCAGCAGCAACAACAATAATGGTAAGTCCAAATTAATAGAATTAGAGGGCCATATGATGCAAGCTGTTTTTCACTCTAATGGATTCGGACATTTGCTCTCTGTCAATGGCCTCGAAACCGGGTCGGATCTTTCCGGACACCAGATCATGGACTTCTGGGATCGTTTGTGCACCGGATTGCAAGCAAGGAAAGTGAGCTTGAATGACGTGTCACAGAAAAAGGGCATGGAACTAAAACTTATAAATGGAATAGCATATGGTGAACCATGGTTTGGAAGGTGGGGCTACAAATTTGGAAGAGGATGCTTTGGAGTGACTCAATCTACATACCAGAAGGCCATTGAAGCCATAAGAAGCATCCCACTTTACCTTTTAAACCACCAAATTGCTGACATACCAATCATTTTCTCAAGGTACCAGACACTCTCTGATCAAACCCTAATCACACTTGGTGACCTATTCCACTTCATGTTAGAGCTCAAGTCTCACCTCCCTCGCCGGGAAAACTACTACTCTGATCCCAATTATAACACCACATCCGGTGGCTTCTCCGTTGAAGCCAATAATTGCCGTTGGTCCCCGAAGAGGATCGAAATGGCAACTAGGGTTATAGTTGAAGCCCTGAAAAGAGCTGAGTTCAGATGGATCTCAAGGCAAGAGGTTAGGGATGCTGCAAGAACCTACATTGGAGACACTGGTTTGCTTGATTTTGTGTTGAAATCTCTTGGAAATCACGTTGTTGGAAACTTCATGGTTCGGAGAAGCTTGAATCCTGTCACAAAAGTTCTTGAATATTGCTTAGAAGACATCTCCAATATTGTTTTCCCTACTCATCAAGAGGGTGACAACAACAACAACAACAACAACAACAGAAGCATAAAGGACAGGTACAAAATCACTAGGGGTCAAGTGACAAAGGACATGTTTTATTTGTACAAGTACATTATCCTTAAAGACCCCAAACAAGTACAAGGATCATCATCAATTTTCTCAGCGATCCCATTGGCGGCGAGAATAATTCTTGACACGAAGTTTCTGATCAAAGACTACTTTGGAGAGCTTCTTCCTTTTCAAGATACAAATGGTCATCTTGGGGTGGCCGACGGAAAACTAAGGCTTCACTGTTCAGTAATACTTAGAAACTACCCAAACAAGGCGTTAATGATCCCACCTTACGAGTGTATCACACTGAGAAGTAACGCCACCATTAATGATCTGAAGCTACAAGTTGAGAGAAACTTCAGAGAGATATATTGGGGATTAAGGAATTTTCGTGTCGATTCGATTAAAAACTTGGAAAGTTGTGGAGGGAATGAGATGGTGTTTGGGATGGTTGAAGTGGGAAGAAAGTTGGTGGTTGAAGGATGGATTGATAATGTTAATGTTAATAATGATAATGATAATGTAGACAATAAAAACATGGTTATAAGTAACAACGTACGAGAGATTTTTGAGGTTAATTATTATGGTGATAATAATGGTGGGAAGGTTGTGGAATGTAGTTGTGGGACTAAAGAAGACGATGGAGAGAGAATGGTGTGTTGTGATATTTGTGAGACTTGGCAGCATACGAGGTGTGTTCGCATTCCAAATGATGAACAAGTTCCTTCTATATTTCTCTGCAAAACATGTGAACAAGAAATTGTTATGTTTTCTTCCTTGCCATAG 2097 0.412 MLLDVEVMGNKKRRRCGRVFRFKNFGEEGYPVEFKGPFRENVNALLEFANCESKYLGFGMPIWSFQLEVHRHPPSHVFLFVIEEAITDTSLNRHCKHCQYVGLGNHFICNKKYHFVLPSKETLAASLSCEVACEVITNGSAISSSSNNNNGKSKLIELEGHMMQAVFHSNGFGHLLSVNGLETGSDLSGHQIMDFWDRLCTGLQARKVSLNDVSQKKGMELKLINGIAYGEPWFGRWGYKFGRGCFGVTQSTYQKAIEAIRSIPLYLLNHQIADIPIIFSRYQTLSDQTLITLGDLFHFMLELKSHLPRRENYYSDPNYNTTSGGFSVEANNCRWSPKRIEMATRVIVEALKRAEFRWISRQEVRDAARTYIGDTGLLDFVLKSLGNHVVGNFMVRRSLNPVTKVLEYCLEDISNIVFPTHQEGDNNNNNNNNRSIKDRYKITRGQVTKDMFYLYKYIILKDPKQVQGSSSIFSAIPLAARIILDTKFLIKDYFGELLPFQDTNGHLGVADGKLRLHCSVILRNYPNKALMIPPYECITLRSNATINDLKLQVERNFREIYWGLRNFRVDSIKNLESCGGNEMVFGMVEVGRKLVVEGWIDNVNVNNDNDNVDNKNMVISNNVREIFEVNYYGDNNGGKVVECSCGTKEDDGERMVCCDICETWQHTRCVRIPNDEQVPSIFLCKTCEQEIVMFSSLP 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1794 698 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 632 692 IPR013083 -
Acco03g1794 698 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 13 692 - -
Acco03g1794 698 CDD PHD_MMD1_like 642 687 - -
Acco03g1794 698 ProSitePatterns Zinc finger PHD-type signature. 643 687 IPR019786 -
Acco03g1794 698 SMART PHD_3 642 688 IPR001965 -
Acco03g1794 698 Pfam PHD-finger 643 689 IPR019787 -
Acco03g1794 698 SUPERFAMILY FYVE/PHD zinc finger 637 690 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1794 Acco-ChrAcco03 43530492 43533346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1794 11 698 PHD Transcription Factor Family AT5G22260 50.927 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco03g1794 PHD 1.3e-08 CL0390