Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1787 ATGGGGAATGTGAATGCGAGAGAAGATGGGAATGGAAGTCCCTCAGGGGTTGAAGAAGAAGGTGGAGGCAGTGGCAATGTACAGGAAGCCATTTCCGCATCGAATAATGTGTCTTCTGAGTTGATGGGTCAATCGCCTCCGACAAGCCCTAGAGCTACCCAATCTCCATTGATGTTCACTCCTCAAGCTCCAGCGGTTCCACTTCAAAGACCTGATGATATGCAAGCCCCAAGTCATTCTTGGATGCAAGCTCCTTCAGCATATGAAGATATGTGCAATGAACATGGAATTCCAACAATGATTACTTGGAGTTATGATGGGAAAGAAGTAGCTGTTGAGGGATCATGGGATAATTGGAAAACAAGAGTACTCATGCAAAGATCTGGGAAAGACTTCACTCTAATGAAGGTGCTGCCGTCTGGTGTTTACCAGTACAGGTTCCTAGTTGATGGGCAGTGGAGGTATGCTCCTGACCTGCCCTGGGCCCAAGATGATGCTGGCAATGCTTACAACGTTTTAGACTTACAGGATTATGTTCCTGAGGACATTGGAAGTATTTCTAGTTTTGAACCTCCTCAGTCACCAGAATCAAGTTATAGCAATTTACTACTTGGTTCTGAAGATTATGCAAAGGAGCCACCTCTGGTTCCCCCCCACCTGCAAATGACGCTGCTTAACGTGCCTGCTGCAAATTCAGAAATTCCACAGCCTTTGTCAAGACCTCAACATGTTGTGCTCAATCATCTCTACATGCAGAAGGGAAAGACCAGCCCTTCAGTGGTTGCACTTGGCACGACTCATCGGTTTCTGGCCAAATATGTCACTGTGGTGCTTTACAAGTCTTTGCAGAGGTAA 855 0.4632 MGNVNAREDGNGSPSGVEEEGGGSGNVQEAISASNNVSSELMGQSPPTSPRATQSPLMFTPQAPAVPLQRPDDMQAPSHSWMQAPSAYEDMCNEHGIPTMITWSYDGKEVAVEGSWDNWKTRVLMQRSGKDFTLMKVLPSGVYQYRFLVDGQWRYAPDLPWAQDDAGNAYNVLDLQDYVPEDIGSISSFEPPQSPESSYSNLLLGSEDYAKEPPLVPPHLQMTLLNVPAANSEIPQPLSRPQHVVLNHLYMQKGKTSPSVVALGTTHRFLAKYVTVVLYKSLQR 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1787 284 Gene3D Immunoglobulins 90 179 IPR013783 -
Acco03g1787 284 Pfam Glycogen recognition site of AMP-activated protein kinase 97 176 IPR032640 -
Acco03g1787 284 MobiDBLite consensus disorder prediction 1 79 - -
Acco03g1787 284 SUPERFAMILY AMPKBI-like 179 281 IPR037256 -
Acco03g1787 284 CDD E_set_AMPKbeta_like_N 98 174 - -
Acco03g1787 284 Gene3D - 185 282 - -
Acco03g1787 284 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 284 IPR043554 -
Acco03g1787 284 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 210 280 IPR006828 GO:0005515
Acco03g1787 284 SMART AMPKBI_2 192 282 IPR006828 GO:0005515
Acco03g1787 284 SUPERFAMILY E set domains 96 182 IPR014756 -
Acco03g1787 284 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1787 Acco-ChrAcco03 43448844 43451751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1787 96 177 Protein tyrosine phosphatase (PTP) family AT3G01510 30.682 3.10e-06 46.2