Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1783 ATGACGGCGTCAAGGGTTCAGCAAAACTCAGCTGGCAGAGGAAGTGGTGGAAGCAGAGAGCAAACCTTGCCGCTTTGGGCCGTCGGAGAAATCATGAAGAAGGTGTTACCGGCGAAGGCGAGGATCTCTGAAGAAGCGAAAGAAAGGGTCCAAGAATACTCGTCGAAGTTCGCCGCCGTCATCATCGAAAGAGCCATCCATGAGTGCCAGGACGACGGAAGCTCTGAGATCGACGGCGGCCACATCATTTTGGCGATGTCCCACCTTGGATTCGATGAATACGTCGGTCCACTCATGAATCACCTGCGCCAGGATTGGAACATTGATGAGACGGAAGCGGAGCCGGAGCAGGAGATGGGTACTAGACCTACTCCGGAATATCGTCTCCGCCGATTCCACGACGGCGGTGACTATCCGAATGGTATTCTTGCGGTTGGGACTGCTGAGAGTTTTCAACATGTGCCCGCTCTCATTTTGAGCAAGATTTATTGA 492 0.5325 MTASRVQQNSAGRGSGGSREQTLPLWAVGEIMKKVLPAKARISEEAKERVQEYSSKFAAVIIERAIHECQDDGSSEIDGGHIILAMSHLGFDEYVGPLMNHLRQDWNIDETEAEPEQEMGTRPTPEYRLRRFHDGGDYPNGILAVGTAESFQHVPALILSKIY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1783 163 Gene3D Histone, subunit A 12 128 IPR009072 GO:0046982
Acco03g1783 163 SUPERFAMILY Histone-fold 20 105 IPR009072 GO:0046982
Acco03g1783 163 MobiDBLite consensus disorder prediction 1 20 - -
Acco03g1783 163 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 108 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco03g1783 163 MobiDBLite consensus disorder prediction 1 17 - -
Acco03g1783 163 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 22 86 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1783 Acco-ChrAcco03 43401620 43402111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1783 14 104 CCAAT-HAP3 Transcription Factor Family AT4G14540 44.086 2.37e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco03g1783 CBFD_NFYB_HMF 5.1e-09 CL0012