Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1782 ATGGAGAGAATGGCGGCGTCAAGCAGTCAGCGAAACTCAGCTGGCAGAGGAAGTGGCGGAAGTAGAGGGAAAACCTTGCCGTTTTTTGCCGTCGAAAAGATCATGAAAAAGGTGTTACCGGAGAAGACGAGGATCTCTAAAGAAGCGAAAGAAAGGGTCCAAGAAAGCTCGTCGAAGTTCGCCGCCGTCATCATCAAAAGAGCCGCCCAGGAGTGCATGAAGGACGGAAGCTCTATGCTCGACGGCCGCCACATCATTTTGGCGTTGTCCAATCTCGGACTCAATGATTACGCCAATGAACTCAAGAATCACCCGCCCCAGTATTGGAACATTGATGAGACGGAACCGCAGCCGGAGCCGGAGCTGGAGCCAGCACAGGAGATAATGATTACTAGACCTACTCCGGAATATGGTCTCTTGCGGTTGGGCCTACTCGTGCGCGACGGCGGCTACTATCCGGATGGGATTCTTGCGGTTGGACCTCCTGAGATTTTTCAAAATGTGCCCGCTCTCATTTTGCGCAAGATTTATTGA 534 0.5206 MERMAASSSQRNSAGRGSGGSRGKTLPFFAVEKIMKKVLPEKTRISKEAKERVQESSSKFAAVIIKRAAQECMKDGSSMLDGRHIILALSNLGLNDYANELKNHPPQYWNIDETEPQPEPELEPAQEIMITRPTPEYGLLRLGLLVRDGGYYPDGILAVGPPEIFQNVPALILRKIY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1782 177 Gene3D Histone, subunit A 22 128 IPR009072 GO:0046982
Acco03g1782 177 SUPERFAMILY Histone-fold 25 111 IPR009072 GO:0046982
Acco03g1782 177 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 110 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco03g1782 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 25 89 IPR003958 -
Acco03g1782 177 MobiDBLite consensus disorder prediction 1 19 - -
Acco03g1782 177 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1782 Acco-ChrAcco03 43398275 43398808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1782 22 108 CCAAT-HAP3 Transcription Factor Family AT2G47810 37.931 1.41e-16 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco03g1782 CBFD_NFYB_HMF 9.5e-12 CL0012