Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1764 ATGGACTCGAAAACCAGTGCTAGAGCTCCCCAGAAACAGCATCATAAGACGGCTGGGATTCAAACAACAGAAGCAAAAGACATCAAATCTTCGAAGACAAGCAAATCTGAATTGGCTGCGCCAGAAGATTTATCAAAATATGTTCAGAACACATCAAAGCGGTACACTGGAGACACTTCTGAAAACAAGAAGCTAGGATTTTCAAACCCAAAGGATTCAGCTGATTCCTTGATTAGTAAATTTGGTTCTTCGGTTTCCTTATCTGTTAATGAACAACTATCTGGAGCTGTCGATCATGTTGTTAATGGAAATAGAGGTTTGCAGGACAGCTCTATTGATCAAGAAAAGAAAACATCAGAATATGGAAGTGTAAAGAGTAGTTCTGTTTCTGCTAAGGTTAGTGATGGGGCCAGCAGCCTGGCAAAGACCAGTGGGAGCGCCAAGGTTAGTGATCGAGCGGAACTTGTTGAGAGTGGCAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGTGATGTGAGCGATGAGAGCACCTGCAGCAGCTTTAGTAGCAGTGTTAACAAGCCTCACAAGGCAAATGACCTGAGATGGGAAGCTATTCAAGCCGTCCGAGCTAAAGATGGGGTTTTGGGCTTAGCTCACTTTAGACTGTTGAAGAGGTTGGGTTGTGGGGATATTGGGAGTGTGTATCTATCAGAGTTGAGTGGAACTAAATGTTATTTCGCAATGAAGGTAATGGATAAAGGGTCTTTAGCAAGCCGTAAAAAGCTGCTTCGTGCTCAGACAGAAAGAGAAATACTGCAATCACTTGACCATCCATTTCTCCCGTCATTGTATACCCATTTTGAGACGGAGAAGTTCTCATGCTTGGTGATGGAATTCTGCCCAGGTGGAGACCTGCACACTCTCAGGCAGAAGCAGCCAGGGAAGCATTTTCCTGAGCAAGCAGTAAAATTTTACGTGGCAGAGGTACTGCTGGCGTTGGAGTACCTCCACATGCTTGGCATTGTCTACCGTGATCTCAAGCCAGAAAATGTCCTTGTTAGGGACGATGGACACATTATGCTTTCAGACTTTGATCTTTCCCTCCGTTGTGCTGTTAGTCCAACTCTTGTTAAAGGTTCAGTGATGGAATCTGATCCTTTGAGAAAGAATCCTGTATATTGTGTGCAGCCTGCTTGTATTGAGCCGCCTTCGTGCATCCAGCCATCCTGTGTTGCTCCAACAACATGCTTTTCGCCTCGGCTCTTTTCTAGCAAGTCAAAGAAGGATCGGAAACCCAAAACTGAAATTGGAAACCAAGTGACTCCATTGCCTGAGCTCATTGCCGAGCCCACCGATGCACGATCTATGTCATTCGTGGGAACCCATGAATACTTGGCACCTGAGATCATCAAGGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGAATCTTTCTATATGAGCTTTTGTTCGGTAAGACTCCTTTCAAGGGATCTGGGAACCGGGCTACGTTGTTTAATGTTGTGGGTCAACCTCTCCGATTTCCGGAAGCGCCTGTTGTAAGTTTTGCAGCAAGGGACCTCATAAGGGGGTTGCTTGTGAAGGAACCACTGAACAGGTTGGCTTATAAACGAGGCGCCACAGAGATAAAGCAACATCCCTTTTTTGAAGGTGTGAATTGGGCACTTATTCGCTGCGCTACCCCACCGGAGATCCCAAAGCCTGTAGAGTATGAGAAGATACCTTCCCCTGCCTCGTCAGCTGGCGAAAAGGCCAGCCACCACATGTCAATTCCCGATCAGAAAGGTTCCGGTAATTATCTTGAGTTTGATTTCTTCTAG 1830 0.4585 MDSKTSARAPQKQHHKTAGIQTTEAKDIKSSKTSKSELAAPEDLSKYVQNTSKRYTGDTSENKKLGFSNPKDSADSLISKFGSSVSLSVNEQLSGAVDHVVNGNRGLQDSSIDQEKKTSEYGSVKSSSVSAKVSDGASSLAKTSGSAKVSDRAELVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDLRWEAIQAVRAKDGVLGLAHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPSLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKGSVMESDPLRKNPVYCVQPACIEPPSCIQPSCVAPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPLNRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEYEKIPSPASSAGEKASHHMSIPDQKGSGNYLEFDFF 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1764 609 Gene3D Transferase(Phosphotransferase) domain 1 446 570 - -
Acco03g1764 609 ProSiteProfiles Protein kinase domain profile. 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1764 609 PANTHER FLIPPASE KINASE 1-RELATED 25 576 - -
Acco03g1764 609 CDD STKc_phototropin_like 213 571 - -
Acco03g1764 609 Gene3D Transferase(Phosphotransferase) domain 1 298 365 - -
Acco03g1764 609 MobiDBLite consensus disorder prediction 45 75 - -
Acco03g1764 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Acco03g1764 609 FunFam serine/threonine-protein kinase D6PK-like 298 365 - -
Acco03g1764 609 Pfam Protein kinase domain 215 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1764 609 Pfam Protein kinase domain 449 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1764 609 Gene3D Phosphorylase Kinase; domain 1 212 297 - -
Acco03g1764 609 MobiDBLite consensus disorder prediction 101 128 - -
Acco03g1764 609 SMART serkin_6 214 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1764 609 MobiDBLite consensus disorder prediction 162 182 - -
Acco03g1764 609 FunFam Serine/threonine-protein kinase AGC1-7 445 570 - -
Acco03g1764 609 SUPERFAMILY Protein kinase-like (PK-like) 192 581 IPR011009 -
Acco03g1764 609 FunFam Serine/threonine-protein kinase D6PK-like 212 297 - -
Acco03g1764 609 MobiDBLite consensus disorder prediction 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1764 Acco-ChrAcco03 43073401 43076504 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1764 34 609 AGC Kinase Gene Family AT5G47750 77.336 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco03g1764 Pkinase 4.2e-36 CL0016