Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1754 ATGTTCACAGTCACCTACACGGCGGAGCACAACCACCCTGCTCCTACTCATTGGAACTCCCTCGTCGGCTCCAGCTACCGGAAGCCCTCGACCACCGCTGCGCTGGTACTGTGGTTAAATCAAGTTTTAGTAGTGATGGAGAAAGGAGGAAAGGGGTACTCGTCGCTGAACAAAGGAGGGAAAGATGACAGTCCTGCAAAATCAGCAAAGGGGAGGAGAGTTCAGTTTGCTGAAGGCACTTTTGACCCCATATCAGGTAGTTCACCCATATCTGGAGGGAAAGCTGCCAGCTCACAGTTTAAAGGAGGAAAGGGAGAGAAGGTTGCAAATGGAGGAAAGAGTACTGCATCTAAAAGCTCAAAATCGTCAGAATTTGGGATTGAGCAGGAACTTCCCAATAATGTCAAATGCGTGATGAATTGTGAGGCTGCTGATATTTTACAAGGAATTCAAGATCGAATGACTATGTTATCTAAAGATCCAGCTATCAAAATACCTGTATCATTTGACAAGGGACTGCAGTATGCCAAAAGCAATAGCCATTATTCAAAGTCAGAGTCTGTTAGGAGCATTCTAGAGCCTTTGGCAGATCTTGGGGTCTCTGAAGCAGAGCTATGTGTAATTGGTAACGTGTGTCCGCAAACTTCGGAAGAGGTTTTTGCTCTGATACCATCACTTAAGGTCTCTGATCTTTGTGATGTTAAATCTGGGAAGCTGCTGACAGATAACTTGAGCAGTCAGGAGAAGCACTATTGA 756 0.455 MFTVTYTAEHNHPAPTHWNSLVGSSYRKPSTTAALVLWLNQVLVVMEKGGKGYSSLNKGGKDDSPAKSAKGRRVQFAEGTFDPISGSSPISGGKAASSQFKGGKGEKVANGGKSTASKSSKSSEFGIEQELPNNVKCVMNCEAADILQGIQDRMTMLSKDPAIKIPVSFDKGLQYAKSNSHYSKSESVRSILEPLADLGVSEAELCVIGNVCPQTSEEVFALIPSLKVSDLCDVKSGKLLTDNLSSQEKHY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1754 251 Pfam RNA polymerase Rpb4 169 227 IPR005574 GO:0006352|GO:0030880
Acco03g1754 251 MobiDBLite consensus disorder prediction 81 95 - -
Acco03g1754 251 PANTHER DNA-DIRECTED RNA POLYMERASE II 106 230 IPR045222 -
Acco03g1754 251 MobiDBLite consensus disorder prediction 53 125 - -
Acco03g1754 251 Gene3D - 115 246 IPR038324 -
Acco03g1754 251 SMART rpol4neu2 128 251 IPR006590 -
Acco03g1754 251 SUPERFAMILY HRDC-like 118 227 IPR010997 GO:0000166|GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1754 Acco-ChrAcco03 42941086 42945016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1754 1 30 WRKY Transcription Factor Family AT4G01250 80.000 1.22e-09 55.8