Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1721 ATGGTCTATAACTCTATATATGCTGATGCTGCAACTTCCATCAATGTGCAACCAAAACACCATTCATATGCTTCTTCTTCTTCTTCTTCTCTTCTTCATAATATGTCATTTTCTTGTGCAAAGAACTTCTTTCAGAGGTTCTGGTTAGATGAAATCAATATGGGAAGTTATTCTTATGGAAACTTTCTGTGTAATGATCTTCTTCCATCTCTTGGATCCCAAATGGTGCAGGAAATCAAGCTGCGAAGATTCATAATCTCTCCTTTCAATCCGAGATACAGGGCTTGGGAGATGATACTGGTAGTTCTAGTCATTTACTCGGCCTGGATATGTCCCTTTGAGTTTGCCTTTCTGTCTACAAAGAAAGATGCATTGTTCGTCATCGACAACGTTATTGACAGCTTCTTTGCCATTGACATCATGCTCACATTCTTTGTTGCATATTTAGATAGTCAGTCTCACCTCATTGTTGATGATCCCTGGAAAATTGCAATCAGGTACATATCAACCTGGTTTATTTTTGACGTCTGCTCAACAGCACCATTTCAGAGCATCAGCCTTCTCTTTACAAGCCATAGCAGTGAGCTTGGCTTTGACCTGCTTAACATGCTTCGGTTATGGCGTCTAAGACGGGTCAGCTCTCTGTTTGCAAGACTTGAGAAAGACATCCGCTTTAACTATTTCTGGACCAGGTGCATAAAACTCATTGCTGTAACATTGTTTACTGTTCACTGTGCCGGATGCGCTTGCTATCTAATTGCAGAGAAGTATCCTGATTCCAAAAGGACCTGGATTGGTGCAACGCACCCAAACTTCAAAGAAGAAGGTCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTAACACTTACCACTACTGGCTATGGGGATTTACATGCTCAAAATCCTGGGGAGATGCTGTTTGATACTGTGTTTATGCTGTTCAATTTAGGATTAACATCATATATCATTGGAAACATGACAAACCTTGTTGTTCACTGGACCAGCAACACCAAAAATTTTAGAGATACGATAAGAGCAGCATCAGAGTTTGCATCAAGGAATCATCTGCCGCATCACCTACAAGATCAAATGTTGTCACACTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAACAAGAAACATTAAATGGTCTGCCTAAGGCAATTCGTTCGGGCATCGCAAATCATCTCTTCTTTCCTATAGTAAAGGAGGTCTACATATTCCATGGAGTTTCCCATGACTTCCTTTTCCAACTGGCCTCAGAAATGGAAGCTGAGTATTTTCCACCCAAGGAAGATGTGATCCTGCAAAATGAGGTTCCTACAGATCTTTATGTGCTAGTTTCAGGAGCAGTGGATCTTGTTCGCCACATGGATGGGTATGACCAAGTTGTGGGGAAGGCAGTTTTGGGAGAAACATTTGGAGAGATTGGGATATTTACCCACAGACCACAACCATTCACTATACGCACTGCAGAGCTTTCTCAAATCTTACGACTCAACAAAACTTCATTAATGAAGGCTGTTCAAGCGCATCCACAAGATTCAAAAATTATTATGGATAACCTTGCCAGGAGATTGAAGGGACAAGACGGCTTTGGTTTTGAGTATCCAAATGCAGAACCTGGATTGGTCCTCCATGAAAAATTAGATGAAGTAAGAGCAAGAGAGAGCCTTTCTCATGCATGCAGAAACAGTTCATATGAGGATTCATTAGTCCAAGAAGGAAGGTACAGAAACTTCACAGACTCAGAGATCACATTGCATAAGGTGACAAGTGAATCTGGAAAAAGGGATATTCATGCTGCTACATTCAAAGGGCAACCAGAGATGGTTGACATACTGCTTGAAAGAGATGCAAATGCAAAGCACCTGAATTTCGTACGTCAGAAATCCAAAACTCAGGTAGAAGAACAGCAAGGTCACAAGAACACTTCTAACCACTTCATAAATTGTGGAGATAGGGAGAGATCAGATGAATATAGAATAAACTTTGAGGAGCTAGATATATTGAACCATGTTAGGAATGACACAACCAGAAACAAAAAACATGGTGATCCCATATCATTTAACTACCCTTTAGAGAATATAAATAAAAATTCTTATTTGAGTAATCCTAACTGCCCAAGCAATAGAGAAGTGGCTAGATTCAACAAGAAGAGAGTCACGATTCACTTGATAGGCCAAAGCAGCAGTACTTCACGAGGACAGCACGGGAAGTTGATTATTCTACCTGATTCAATAGAAGAGCTGCTCAAGGTTGCAGAAGAAAAGTTTGCAGGATCAAAAACTAAAAGAGTTATTAATACAGAGAAAGCAGAGATAGATGACATAAGCGTTGTTCGAGATGGCGATCACCTCTTTTTCCATTGCAGCAATAGTGAAAATTTGCAGTCATTATGTTACCTATCGTAG 2427 0.4026 MVYNSIYADAATSINVQPKHHSYASSSSSSLLHNMSFSCAKNFFQRFWLDEINMGSYSYGNFLCNDLLPSLGSQMVQEIKLRRFIISPFNPRYRAWEMILVVLVIYSAWICPFEFAFLSTKKDALFVIDNVIDSFFAIDIMLTFFVAYLDSQSHLIVDDPWKIAIRYISTWFIFDVCSTAPFQSISLLFTSHSSELGFDLLNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCIKLIAVTLFTVHCAGCACYLIAEKYPDSKRTWIGATHPNFKEEGLWDRYVTAIYWSIVTLTTTGYGDLHAQNPGEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSNTKNFRDTIRAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNGLPKAIRSGIANHLFFPIVKEVYIFHGVSHDFLFQLASEMEAEYFPPKEDVILQNEVPTDLYVLVSGAVDLVRHMDGYDQVVGKAVLGETFGEIGIFTHRPQPFTIRTAELSQILRLNKTSLMKAVQAHPQDSKIIMDNLARRLKGQDGFGFEYPNAEPGLVLHEKLDEVRARESLSHACRNSSYEDSLVQEGRYRNFTDSEITLHKVTSESGKRDIHAATFKGQPEMVDILLERDANAKHLNFVRQKSKTQVEEQQGHKNTSNHFINCGDRERSDEYRINFEELDILNHVRNDTTRNKKHGDPISFNYPLENINKNSYLSNPNCPSNREVARFNKKRVTIHLIGQSSSTSRGQHGKLIILPDSIEELLKVAEEKFAGSKTKRVINTEKAEIDDISVVRDGDHLFFHCSNSENLQSLCYLS 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1721 808 SUPERFAMILY Voltage-gated potassium channels 88 333 - -
Acco03g1721 808 ProSiteProfiles KHA domain profile. 725 808 IPR021789 -
Acco03g1721 808 CDD CAP_ED 411 524 IPR000595 -
Acco03g1721 808 ProSiteProfiles Ankyrin repeat profile. 599 631 IPR002110 GO:0005515
Acco03g1721 808 PANTHER POTASSIUM CHANNEL AKT1 61 626 IPR045319 GO:0005249|GO:0006813
Acco03g1721 808 Gene3D Jelly Rolls 404 535 IPR014710 -
Acco03g1721 808 SMART cnmp_10 411 528 IPR000595 -
Acco03g1721 808 Pfam Ion transport protein 94 340 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco03g1721 808 FunFam Potassium channel KAT3 95 335 - -
Acco03g1721 808 PRINTS EAG/ELK/ERG potassium channel family signature 325 334 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g1721 808 PRINTS EAG/ELK/ERG potassium channel family signature 307 318 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g1721 808 PRINTS EAG/ELK/ERG potassium channel family signature 140 149 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g1721 808 PRINTS EAG/ELK/ERG potassium channel family signature 129 139 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g1721 808 PRINTS EAG/ELK/ERG potassium channel family signature 281 298 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco03g1721 808 ProSiteProfiles cAMP/cGMP binding motif profile. 411 530 IPR000595 -
Acco03g1721 808 Gene3D - 94 334 - -
Acco03g1721 808 SUPERFAMILY cAMP-binding domain-like 338 531 IPR018490 -
Acco03g1721 808 Pfam Cyclic nucleotide-binding domain 431 516 IPR000595 -
Acco03g1721 808 Pfam KHA, dimerisation domain of potassium ion channel 724 793 IPR021789 -
Acco03g1721 808 Gene3D Helix hairpin bin 335 401 - -
Acco03g1721 808 FunFam Potassium channel KAT2 399 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1721 Acco-ChrAcco03 42174263 42179162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1721 709 793 Ion Channels AT5G46240 46.591 4.84e-17 84.0