Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1715 ATGTTGACGACCTTTGGTGAGAGGGCAGCAAAGAGAAAGCGAGGGTTTTCGAGTCGTCGGATCACACAAACACAGAAGCCGCAAGCTCGACCCTTGTGTTCTACCCCGGCGCCCACAATCATGTCAAGGAGTAGAAAGACTAGAGAGCCAAAGGAAGAAACTGTTACTCTTGGCCCAACTGTCAGAGAGGGCGAACATGCCTTTGGAGTGGCCCATATTTATGCATCATTTAATGATACATTCATTCACGTGACTGATTTGTCTGGAAGGGAAACCCTTGTTCGCATAACAGGTGGAATGAAGGTGAAGGCTGACAGAGATGAGTCTTCCCCCTATGCTGCTATGCTTGCAGCACAGGATGTATCTACTAGATGCAAGGAGCTGGGCATAACTGCTCTTCATATTAAGCTTCGTGCCACTGGTGGAAACAAGACGAAAACACCAGGTCCTGGTGCTCAGTCAGCTCTCCGTGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGGATAGAGGATGTGACTCCAATCCCATCAGACAGCACCAGGAGAAAGGGTGGTAGAAGAGGAAGAAGGCTTTAA 576 0.4896 MLTTFGERAAKRKRGFSSRRITQTQKPQARPLCSTPAPTIMSRSRKTREPKEETVTLGPTVREGEHAFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1715 191 MobiDBLite consensus disorder prediction 1 53 - -
Acco03g1715 191 ProSitePatterns Ribosomal protein S11 signature. 156 178 IPR018102 -
Acco03g1715 191 Gene3D Ribosomal protein S11 41 191 IPR036967 GO:0003735|GO:0005840|GO:0006412
Acco03g1715 191 MobiDBLite consensus disorder prediction 20 42 - -
Acco03g1715 191 FunFam 40S ribosomal protein S14 41 191 - -
Acco03g1715 191 Pfam Ribosomal protein S11 69 187 IPR001971 GO:0003735|GO:0005840|GO:0006412
Acco03g1715 191 MobiDBLite consensus disorder prediction 171 191 - -
Acco03g1715 191 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 44 186 IPR001971 GO:0003735|GO:0005840|GO:0006412
Acco03g1715 191 SUPERFAMILY Translational machinery components 66 187 - -
Acco03g1715 191 Hamap 30S ribosomal protein S11 [rpsK]. 11 188 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1715 Acco-ChrAcco03 42074128 42077405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1715 45 180 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 91.176 9.02e-91 260