Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1714 ATGAGCGAGGAAGGCAAGAACAGGGGTTTTGCCACCGATCCCCCCAACCAGCCTTACTATGGCACCTTTCAAGGCGTCGCCAACTACTATCCGACTGTTCCACCTCCACCGCCACAGCGACAGCCTCAGCCGGTTGTAGGATTTCCTCAGCCCGTTCCGCCTCCGGTAGCTTACGGTGGTAATAATTTCCAAGGATATCAAACCGTTCCGGGTTATGCCGTTGCTGAAGGAATGCCCATGAGAGAACATCGTCTTCCTTGTTGTGGACTTGGTCTTGGTTGGTTCTTGTTTATAGCGGGATTTTTTCTTGGTGGCATTCCATGGTATGCTGGAACTCTTGTGCTACTGTGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAGTTGCATGCACAGTTGCTACAATCATTGCTATAATAGCTGTGACTTTTGATGTTACAAATAAAGTTCATGATTGGATTGGTCTACTTTGGCACGTGTCAACATTTATGAGAGAGGGAGAGAGGCGTCAGAGTCTTTCCTGTGTTCACCTTCTATCGGAAATGGTTGCGTTCAGGTTCCACCAGTACCAGGTCGTTGGGAGAGCTCTGCCCACGGAAGCAGATGAACACCCTAAGATCTATCGAATGAAACTCTGGGCGACGAACGAAGTTCGCGCCAAGTCGAAGTTCTGGTATTTTTTGAGGAAACTGAAGAAGGTTAAGAAAAGCAATGGTCAAGTGCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACAACGATCAAGAACTATGGCATTTGGTTGCGTTATCAGAGTAGGACTGGGTATCACAACATGTACAAAGAGTACCGTGATACCACTCTAAACGGTGGCGTCGAGCAGATGTACAATGAGATGGCCTCCCGTCACAGGGTCCGGTTCCCATGCATTCAGATCATCAAGACAGCCACCATCCCAGCCAAGCTTTGCAAGAGGGAGAGCAGCAAGCAATTCCACAACTCAAAGATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACAACATTCAAAGCCAAAAAGCCTAACTTGTTTATGTAA 1080 0.4731 MSEEGKNRGFATDPPNQPYYGTFQGVANYYPTVPPPPPQRQPQPVVGFPQPVPPPVAYGGNNFQGYQTVPGYAVAEGMPMREHRLPCCGLGLGWFLFIAGFFLGGIPWYAGTLVLLCVQMDYREKPGLVACTVATIIAIIAVTFDVTNKVHDWIGLLWHVSTFMREGERRQSLSCVHLLSEMVAFRFHQYQVVGRALPTEADEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESSKQFHNSKIKFPLVYRKVRPPTRKLKTTFKAKKPNLFM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1714 359 Gene3D - 176 251 - -
Acco03g1714 359 PANTHER 60S RIBOSOMAL PROTEIN L18A 184 358 IPR028877 -
Acco03g1714 359 SUPERFAMILY RplX-like 252 327 - -
Acco03g1714 359 FunFam 60S ribosomal protein L18a 182 252 - -
Acco03g1714 359 Gene3D - 252 324 - -
Acco03g1714 359 MobiDBLite consensus disorder prediction 1 23 - -
Acco03g1714 359 FunFam 60S ribosomal protein L18a 253 328 - -
Acco03g1714 359 Hamap 50S ribosomal protein L18Ae [rpl18a]. 187 250 IPR028877 -
Acco03g1714 359 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 188 309 IPR023573 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1714 Acco-ChrAcco03 42057015 42065628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1714 181 359 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 91.061 3.07e-120 344