Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1710 ATGGATATTAGCGAAGAAGTCAGGGCGGCTCACAAACGAGAATTCGCCGATTTCCTGGATCAAGATGTTGGAAAAGGGATTTACATGGACGAGATCAAAGCAATGATCAACCACAAGCGTCATCGCCTCATCATCAATATCTCTGATCTTCATAGCTTTCGTGATTTGGGTAATAGGATTCTCAGGAACCCTAGTGAGTACATTCAATCATTCTGTGATGCAGTAACGGATGCTGCCCGTGCTACTGACCCCAAGTATTTGAAGGAAGGAGAGCATGTGCTTGTAGGATTTGAAGGCCCCTTTGTTTCCCGTCGTGTCACCCCAAGGGATCTTCTGTCTGAATTCATAGGTTCTATGGTCTGCGTTGAAGGCATTGTCACTAAATGCTCGCTTGTTAGGCCAAAGGTTGTTAAAAGTGTTCACTTCTGCCCCACGACGAAAAAATTCACCTCTCGCGATTATCGTGATATCACTTCCAATATGGGTTTGCCTACTGGCTCTGTTTATCCCACAAGGGATGAAAATGGCAACTTACTGGTTACTGAGTATGGATTGTGCAAATATAAAGATCATCAAACCTTATCCATGCAAGAAGTTCCTGAGAATTCTGCACCTGGTCAGCTTCCAAGAACGGTAGATGTTATAGCAGAGGATGACCTTGTTGACTGTTGCAAACCTGGGGACCGTGTGGCTATTGTGGGGATATACAAGGCTCTTGCAGCAAAAAGTAAAGGCAGTGTGAATGGAGTATTCAGGACTGTGCTCATAGCCAACAATGTCTCTCTTCTCAACAAAGAGGCTAATGCCCCAATCTACAGTGCTGAAGATCTAAAAAACATAAAGAAGATTGCTGAGAGAGATGATGCATTTGACCTACTTGGTAGTTCACTTGCACCTTCTATTTATGGGCATTCCTGGATAAAGAAAGCCGTGATTTTGTTGATGCTTGGGGGAGTCGAAAAGAACTTAAAGAATGGTACCCATTTGCGAGGTGACATTAACATGATGATGGTTGGAGATCCGTCTGTTGCCAAGTCTCAACTCTTAAGAGCAATTATGAATATTGCTCCCTTGGCCATATCTACTACAGGTCGGGGTTCCTCTGGGGTTGGTTTAACAGCAGCAGTTACTTCCGATCAAGAAACAGGGGAAAGAAGGCTAGAAGCTGGAGCAATGGTTCTGGCTGATCGAGGTGTTGTCTGCATTGATGAGTTTGACAAAATGAATGATCAAGATCGGGTTGCTATACATGAAGTTATGGAACAACAAACTGTAACTATTGCCAAAGCTGGTATCCACGCATCTCTTAATGCTCGTTGCAGTGTGGTGGCTGCTGCAAATCCCATATATGGAACTTATGACCGATCATTGACTCCGACGAAAAATATTGGACTCCCAGACTCATTGCTTTCCCGATTTGATCTTCTGTTTATAGTCTTGGACCAAATGGATCCTGATATTGATCGTCATATCTCAGAGCATGTCTTGCGTATGCATCGATACCGTTCTGCCGTTGATGGAGGTGAGGCAGCATTTGATGGTGCCCCAAGATATGGAAGAGAAGATGATGCCGATGCCGACTCAGCTGTCTTTGTCAAATATAACCGGATGCTACATGGAAAGAAAACAGATAAAAGTCGCAAGCGAGATGTGCTCACTATCAAGTTTCTTAAAAAGTACATTCATTATGCTAAACATAGGATTCAACCTGAACTTACTGATGAGGCATCTGACCACATTGCCACAGCTTATGCAGAGCTCAGAAATGCTGGTTCAAATGCTACGACTGGAGGAACCCTACCTATCACAGCTAGAACTTTGGAAACCATTATACGTCTCTCAACAGCTCATGCCAAATTGAAGTTGAGCAGAGAGGTCTTAAAGTCTGATGTTGAAGCTGCCCTGAAAGTTCTTAACTTTGCAATATATCACAAAGAACTAACCGAAATGGAGGAGCGTGAGCAAGAGAGGGAGAGAGAAATGGAGAGGAAACGCAGGGCTGAGCAGCATCCTGCTGAAAATGATGAACCTAGTCGAGGTCCTAAAAGTAGAAGAACCTCCACGGCTGAAGCCATGGAAGTTGATCAGACTTCGGCAGCCCAATCTGCTACCGGTCTCACACCTGAAAGAATCGAAGCATTCAATTCTTTATTTGGTCAGCATATGCGTGCCAATCGCTTGGATCTCATAACAATTTCAGTTATAGAGAATGTTGTCAACCAAGGGGCAGAATCCAGTTACAGCAGAGAAGATATATTAGTCCTGTTGGAGAAGCTGCAAGATGACAATAGAGTGATGATAGCTGATGGAGTGGAAGCAGAATCTCACTCCAGAGTTGATGCAACTACTTGCTGGGAGATCCTTGGGCGCAAAGTTGACGTAACAGAATTCTCCTTTCAAAGGAACGCTAATGTCTCCCTAAAATCACCAAACACAGAAATGGTTTCCCGAAATCAACCCAAAGAAGACAACCCTAAGAAGCAATGGTCCTTGAGAGACTTTCAGATCGGAAAACCTCTTGGAAAGGGAAAATTCGGTAGAGTCTACGTCGCTCGAGAAGTGAAGAGCAAGTATATTGTGGCGCTCAAGGTTATCTTTAAGGAACAAATAGAAAAGTATAGAATTCATCATCAACTGAAGAGAGAGATGGAGATTCAGACTAGTCTTCAGCACCCCAACATTCTGCGTCTCTATGGTTGGTTTCATGATGCTGAACGGGTTTTCTTGATACTTGAGTATGCTCATAACGGAGAGCTTTACAAGGAGCTCAGAAAAAAAGGTCATCTCAGTGAGAAGCAAGCAGCCACGTATGTGTTGAGCCTCACAAAGGCGTTGGCATATTGTCATGAGAAGCATGTCATTCATAGGGATATAAAGCCTGAGAATTTGTTACTTGACCATGAGGGTCGCCTTAAAATTGGAGACTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACATACCATGTGTGGAACATTGGACTATCTAGCACCAGAAATGGTAGAAAACAAAGAACATGATTTTTCTGTTGATAACTGGACTTTGGGTATACTTTGTTACGAATTCCTCTATGGTTCTCCCCCATTTGAGGCTGAGAGTCAAGTTGACACTTTCAAGAGGATAATGAAGATTGACCTAAATTTTCCTTCTACTCCTACTGTTTCTTCAGAAGCCAAAAATTTGATTAGCCGGCTCTTGGTGAAAGATTCCACAAGAAGGCTATCACTTCAGAAGATTATGGAGCATCCTTGGATACTCAAGAATGCTAATCCTATGGCTGAAATGAGATCTAAAGTATCATCAGAAGATGATAAATCTCGCAATGATTTTCCTGGCTTGCTTGTGTCTCCAATTCTAGCCCTCTTTCTAGCTCCAATTTGA 3381 0.4309 MDISEEVRAAHKREFADFLDQDVGKGIYMDEIKAMINHKRHRLIINISDLHSFRDLGNRILRNPSEYIQSFCDAVTDAARATDPKYLKEGEHVLVGFEGPFVSRRVTPRDLLSEFIGSMVCVEGIVTKCSLVRPKVVKSVHFCPTTKKFTSRDYRDITSNMGLPTGSVYPTRDENGNLLVTEYGLCKYKDHQTLSMQEVPENSAPGQLPRTVDVIAEDDLVDCCKPGDRVAIVGIYKALAAKSKGSVNGVFRTVLIANNVSLLNKEANAPIYSAEDLKNIKKIAERDDAFDLLGSSLAPSIYGHSWIKKAVILLMLGGVEKNLKNGTHLRGDINMMMVGDPSVAKSQLLRAIMNIAPLAISTTGRGSSGVGLTAAVTSDQETGERRLEAGAMVLADRGVVCIDEFDKMNDQDRVAIHEVMEQQTVTIAKAGIHASLNARCSVVAAANPIYGTYDRSLTPTKNIGLPDSLLSRFDLLFIVLDQMDPDIDRHISEHVLRMHRYRSAVDGGEAAFDGAPRYGREDDADADSAVFVKYNRMLHGKKTDKSRKRDVLTIKFLKKYIHYAKHRIQPELTDEASDHIATAYAELRNAGSNATTGGTLPITARTLETIIRLSTAHAKLKLSREVLKSDVEAALKVLNFAIYHKELTEMEEREQEREREMERKRRAEQHPAENDEPSRGPKSRRTSTAEAMEVDQTSAAQSATGLTPERIEAFNSLFGQHMRANRLDLITISVIENVVNQGAESSYSREDILVLLEKLQDDNRVMIADGVEAESHSRVDATTCWEILGRKVDVTEFSFQRNANVSLKSPNTEMVSRNQPKEDNPKKQWSLRDFQIGKPLGKGKFGRVYVAREVKSKYIVALKVIFKEQIEKYRIHHQLKREMEIQTSLQHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKKGHLSEKQAATYVLSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSRSKRHTMCGTLDYLAPEMVENKEHDFSVDNWTLGILCYEFLYGSPPFEAESQVDTFKRIMKIDLNFPSTPTVSSEAKNLISRLLVKDSTRRLSLQKIMEHPWILKNANPMAEMRSKVSSEDDKSRNDFPGLLVSPILALFLAPI 1126
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1710 1126 Gene3D - 3 99 - -
Acco03g1710 1126 ProSitePatterns Protein kinases ATP-binding region signature. 840 867 IPR017441 GO:0005524
Acco03g1710 1126 FunFam Serine/threonine-protein kinase ark1 826 1099 - -
Acco03g1710 1126 ProSiteProfiles Protein kinase domain profile. 834 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1710 1126 MobiDBLite consensus disorder prediction 690 706 - -
Acco03g1710 1126 Coils Coil 644 670 - -
Acco03g1710 1126 CDD MCM3 292 641 - -
Acco03g1710 1126 FunFam DNA helicase 5 104 - -
Acco03g1710 1126 SUPERFAMILY Protein kinase-like (PK-like) 816 1096 IPR011009 -
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein family signature 442 454 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein family signature 330 345 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein family signature 418 431 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein family signature 469 477 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein family signature 390 404 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 SMART mcm 104 643 IPR031327 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 Pfam MCM N-terminal domain 12 82 IPR027925 -
Acco03g1710 1126 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 8 690 IPR031327 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 SUPERFAMILY Nucleic acid-binding proteins 13 259 IPR012340 -
Acco03g1710 1126 MobiDBLite consensus disorder prediction 650 689 - -
Acco03g1710 1126 Pfam Protein kinase domain 835 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1710 1126 Pfam MCM OB domain 109 238 IPR033762 -
Acco03g1710 1126 ProSiteProfiles MCM family domain profile. 289 495 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco03g1710 1126 Gene3D Transferase(Phosphotransferase) domain 1 918 1111 - -
Acco03g1710 1126 Pfam MCM AAA-lid domain 556 639 IPR041562 -
Acco03g1710 1126 Gene3D Phosphorylase Kinase; domain 1 822 917 - -
Acco03g1710 1126 Gene3D - 109 239 IPR012340 -
Acco03g1710 1126 SMART AAA_5 331 484 IPR003593 GO:0016887
Acco03g1710 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 299 656 IPR027417 -
Acco03g1710 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 630 645 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 491 501 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 458 468 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 207 219 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Acco03g1710 1126 PRINTS Mini-chromosome maintenance (MCM) protein 3 signature 181 195 IPR008046 GO:0003677|GO:0005524|GO:0006270|GO:0042555
Acco03g1710 1126 Gene3D - 271 664 IPR027417 -
Acco03g1710 1126 Gene3D - 135 189 - -
Acco03g1710 1126 MobiDBLite consensus disorder prediction 650 706 - -
Acco03g1710 1126 FunFam Aurora kinase A 826 917 - -
Acco03g1710 1126 ProSitePatterns MCM family signature. 398 406 IPR018525 GO:0003677|GO:0005524|GO:0006260
Acco03g1710 1126 SMART serkin_6 834 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1710 1126 CDD STKc_Aurora 833 1086 - -
Acco03g1710 1126 FunFam DNA helicase 135 189 - -
Acco03g1710 1126 Pfam MCM P-loop domain 277 499 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco03g1710 Acco-ChrAcco03 42019994 42031928 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1710 1 575 Core DNA Replication Machinery Family AT5G46280 81.771 0.0 970
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Acco03g1710 Pkinase 3.1e-74 CL0016