Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1707 ATGGCGAAGGAAGCTACGATGTCACGAAAGAGGTCTCTCTCATCACCCACTGTTTCTGCTTCTGCTGAACACTCTAGAAGAACTTCTTCTGACGGCAGGATAGTGTTGAGGGTAAAATTAGATGAGGGGATGAAGGGATCTTCCCGGCTGAATAAGTCAGGGAAGAAACCCAAAGCAAAGCAAAAGAAGATTAACAAAAAACTTGATGCTAAGAGACCAAAGAAACCCCCAACTGCTTTCTTCTACTTCTTGGAGGATTTCCGTAAAGAATTTCAAGAGCAGAATCCAGATGTCAAGTCAATGCGTGATATCGGCAAGGCTTGCGGAGAGAAGTGGAAAACAATGACTTATGAGGAGAAGGTTCAATATTACGATATAGCCACAGAGAAACGAGCAGAATTTGATAGAGCAATGATCGAATATAACAAGAAAATGGAAAGTGGAGAGTACGAAGAAACTGATGAAGAATCAGAGTTTGATGATGTTTAA 489 0.4131 MAKEATMSRKRSLSSPTVSASAEHSRRTSSDGRIVLRVKLDEGMKGSSRLNKSGKKPKAKQKKINKKLDAKRPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRAMIEYNKKMESGEYEETDEESEFDDV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1707 162 MobiDBLite consensus disorder prediction 26 49 - -
Acco03g1707 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 47 157 IPR031061 -
Acco03g1707 162 MobiDBLite consensus disorder prediction 1 74 - -
Acco03g1707 162 MobiDBLite consensus disorder prediction 8 25 - -
Acco03g1707 162 Pfam HMG (high mobility group) box 73 142 IPR009071 -
Acco03g1707 162 SMART hmgende2 72 143 IPR009071 -
Acco03g1707 162 MobiDBLite consensus disorder prediction 51 70 - -
Acco03g1707 162 CDD HMG-box_AtHMGB1-like 74 134 - -
Acco03g1707 162 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 73 142 IPR009071 -
Acco03g1707 162 Gene3D High mobility group box domain 66 157 IPR036910 -
Acco03g1707 162 SUPERFAMILY HMG-box 66 147 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1707 Acco-ChrAcco03 41991921 41996628 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Acco03g1707 HMG_box 5.5e-18 CL0114