Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1652 ATGGTGCTAAAAGTAACTAGAGACTTAAATGCAGTAAAGAAAGAAGATGCTGCTGCTTCTAATTCAACCTCTGAATCCACCAATATAAGTAGCATATGGGTAAAAGGGAAACGTATTGGATCTGGTGGATATGGGACTGTTTATGTTGCCCGCAAGAGGGGAACAGGAGACGTATGTGCAGTTAAGGAAATTAAAGACATTCACAAACCTGAACACATGAAATCCATACAAAAGGAAATCAATATTCTCTGCCAACTGGAACATCCAAACATTGTAAAGTATTATAACCATGAAGAAGATGGACACACAATTTCTGTATACATGGAATACATCGAATCAGGCTCACTGAATGATATATTGAAACGGGGTGCTTTACCTGAAACTTTAATTCGAAAGCTCACAAAACAAATTCTCTCCGGCTTGGCTTACCTGCACAGCAAAAGAGTAGTTCACAGGGACTTAAAGCCGCACAATATACTTGTTGATCCTCAAGGCACTGTAAAGCTGGTCGACTTTGGTGAGTCTAAGCATCTTTTTGAACTTGGAGAATATAAGAGCTCGGGTGAAGCTTATGCTGCTGACATATGGAGTTTGAGTTGTGTGATCATTGAAATGTTCTCAAGGGAGCATCCTTGGCCTCAAGGTACTTGGGAAGTACTACTATATAACACTAAAACAAATTCATTGACTAAGCAGATGCAGGCCATGTATAATGTTTCTGTTAAAAAGCAACGTCCGGCCATACCAGACGAGTTGTGCGACGAGGGTAAACGATTTCTTGAACTGTGCTTCCGAAGAACTCCAGCCGACCGCCCATCTGCTGAACATTTACAACACCATCCCTTTGTAAAATATCAAACTTAG 864 0.4062 MVLKVTRDLNAVKKEDAAASNSTSESTNISSIWVKGKRIGSGGYGTVYVARKRGTGDVCAVKEIKDIHKPEHMKSIQKEINILCQLEHPNIVKYYNHEEDGHTISVYMEYIESGSLNDILKRGALPETLIRKLTKQILSGLAYLHSKRVVHRDLKPHNILVDPQGTVKLVDFGESKHLFELGEYKSSGEAYAADIWSLSCVIIEMFSREHPWPQGTWEVLLYNTKTNSLTKQMQAMYNVSVKKQRPAIPDELCDEGKRFLELCFRRTPADRPSAEHLQHHPFVKYQT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1652 287 SMART serkin_6 33 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1652 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Acco03g1652 287 Pfam Protein kinase domain 34 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1652 287 CDD STKc_MAPKKK 33 283 - -
Acco03g1652 287 Gene3D Phosphorylase Kinase; domain 1 25 115 - -
Acco03g1652 287 Gene3D Transferase(Phosphotransferase) domain 1 185 287 - -
Acco03g1652 287 PIRSF ILK 10 278 - -
Acco03g1652 287 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Acco03g1652 287 ProSiteProfiles Protein kinase domain profile. 33 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1652 287 Gene3D Transferase(Phosphotransferase) domain 1 116 184 - -
Acco03g1652 287 SUPERFAMILY Protein kinase-like (PK-like) 33 284 IPR011009 -
Acco03g1652 287 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 20 285 - -
Acco03g1652 287 PRINTS Tyrosine kinase catalytic domain signature 143 161 IPR001245 GO:0004672|GO:0006468
Acco03g1652 287 PRINTS Tyrosine kinase catalytic domain signature 252 274 IPR001245 GO:0004672|GO:0006468
Acco03g1652 287 PRINTS Tyrosine kinase catalytic domain signature 108 121 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1652 Acco-ChrAcco03 40101613 40107107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1652 31 287 MAP Kinase Kinase Kinase AT1G53570 40.647 5.09e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1652 Pkinase 7.5e-56 CL0016