Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1650 ATGGCGAGGGTTGCTGGCGATCCCTGCCCAAAGCGAGGCAACTGCACTCAACCAGATGATGAGCTCATCATCAGGAAATCCCCAATCTTCATCATCATCATCATATGTTTTAGCCAACGGGAAATATGTGATCCCCCTATTGGAGATGGTGGATCCGCATCTGTTCATGTTGCCTCTAACCGAGCAACTAGAGACTTAAAATGTAGTAAAGAAAGAAGGTGCTACTGCTTCTATTCAACCTCTGAATCCACCACCAATATTAGTAGCATATGGGTAAAAGGGAAACGTATTGGATCTGCTGGATATGGGACTGTTTATGTTGCCCACGACAGGAAAACAGGAGACTTATGTGCAGTTAAGGAACTTAAAGACATTCACAAACTTGAAAAGACAGAATCCTTACTAAAGGAAATCGAAATTCTCAGCCAACTGGAACATACAAACGTTGTAAAGGATTTAAAGCCAGACAATCTACTTGTCGGTTCCAATGACATTATAAAGCTGATTGATTTTGGTTTGGCTAAGCATCTGGAAGCATCAGTGGGCAGTCACTCTATGTTGGGAACTCTATATTATGCAGCCCCCGAGGTTGTTGATAGAAGCATAAAATTTCAGAGCTCGCGTGAAGCTTATAATGCTGATATATGGAGTTTAGGTTGTATAATCATTGAAATGTTCTCAGGGAACCATCCTTGGCCTGGTTTGGAACCGATACAGGCCAGCTTTAAAGTTATTCAAAAGCAACATCCGCCCATACCAGAAAATTTATGTCAAGAGGGTAAAGATTTTCTCGAACTCTGCTTCATAAGAAATCTAGCGGATCGCCCATCTGCTTCAGCATTACTAGACCATCCCTTTGTAACACTACAAACAACTTCGCTAGCTTGCTGA 891 0.4209 MARVAGDPCPKRGNCTQPDDELIIRKSPIFIIIIICFSQREICDPPIGDGGSASVHVASNRATRDLKCSKERRCYCFYSTSESTTNISSIWVKGKRIGSAGYGTVYVAHDRKTGDLCAVKELKDIHKLEKTESLLKEIEILSQLEHTNVVKDLKPDNLLVGSNDIIKLIDFGLAKHLEASVGSHSMLGTLYYAAPEVVDRSIKFQSSREAYNADIWSLGCIIIEMFSGNHPWPGLEPIQASFKVIQKQHPPIPENLCQEGKDFLELCFIRNLADRPSASALLDHPFVTLQTTSLAC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1650 296 Gene3D Phosphorylase Kinase; domain 1 71 152 - -
Acco03g1650 296 Gene3D Transferase(Phosphotransferase) domain 1 153 295 - -
Acco03g1650 296 SUPERFAMILY Protein kinase-like (PK-like) 91 288 IPR011009 -
Acco03g1650 296 Pfam Protein kinase domain 152 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1650 296 Pfam Protein kinase domain 92 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1650 296 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 151 - -
Acco03g1650 296 ProSiteProfiles Protein kinase domain profile. 1 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1650 296 SMART serkin_6 91 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1650 Acco-ChrAcco03 40076919 40080515 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1650 47 293 MAP Kinase Kinase Kinase AT5G66850 37.594 4.01e-39 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco03g1650 Pkinase 6.8e-30 CL0016