Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1642 ATGTCTGATGAGCATAATAAGGAACTATACGGCCAAGGCAGATCCACCATGTACTCATCATCGTTGTCTTATGATTTACAAGCTTTTGATCCTTCTTCTTACATGAGCTTAACCGAGTGTCTCCAAATAGGAGCCATGGACTACAATTCACTTGCAACTTCTTTTGGGCTCTCTGAGGTTTTGATTTCTTCTGCTGACCAACAAGGCAACACTCAGCAGCCATCATCACGAGATATTGCAGACTGTGGTGTCGCCGGCGCCGGAGGTGAAACTCCACGACTCACCCATAACTCATCTCTCTCTTCTTCTTCTTCTGAACCTGGCGCTGAAGAAGAAGATTCTGGAAAAAACACTGTAGTGGACGATCATAACCGAGCAAAAGGAGAAGAGGAAGCAGAAAAATCTAAGAAAGGGAAGAAAGGAAAGAAGAAAGGAGAGAAGAAAGAGAAGGAGCCAAGGTTTGCTTTCATGACAAAGAGTGAGGTTGATCAGCTTGAAGATGGTTACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGCTATTATAGGTGCACAACACAGAAGTGCACAGTGAAGAAACGAGTGGAGAGGTCGTTTGAGGATCCAACAACTGTGATAACAACGTACGAAGGTCAGCATAACCATCCTCTCCCCACTTCTCTCAGAGGGAATTATAATTCTGCCGCCATGTTCACGCCTTCTTCTTCTTCTTCCTCGACTTCCTCGTCCTCTTCCTTTCTGTCTCCTCTCATGATGATCCCAACCCTGCCATTACCTCATCATCAAGACTTGCTTCGCCTTCATGGAGCCTCTAATAATATGAATAATAATTCTCTCTATTATTCTCACAACTATGCTAATCCTAACTCTGTTCATCAGTATCGTCATCATAATTATCATCATCAGCTTCCACTGCCTGATCAGCATCATGACAATGGCCTTCTTCAAGACTTAATCCCTTCTTCTATGTTCTTCAAACAAGAACCTCGAGAATGA 1017 0.4356 MSDEHNKELYGQGRSTMYSSSLSYDLQAFDPSSYMSLTECLQIGAMDYNSLATSFGLSEVLISSADQQGNTQQPSSRDIADCGVAGAGGETPRLTHNSSLSSSSSEPGAEEEDSGKNTVVDDHNRAKGEEEAEKSKKGKKGKKKGEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPLPTSLRGNYNSAAMFTPSSSSSSTSSSSSFLSPLMMIPTLPLPHHQDLLRLHGASNNMNNNSLYYSHNYANPNSVHQYRHHNYHHQLPLPDQHHDNGLLQDLIPSSMFFKQEPRE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1642 338 FunFam WRKY transcription factor 57 151 225 - -
Acco03g1642 338 SUPERFAMILY WRKY DNA-binding domain 157 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco03g1642 338 SMART WRKY_cls 165 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g1642 338 ProSiteProfiles WRKY domain profile. 160 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g1642 338 MobiDBLite consensus disorder prediction 92 108 - -
Acco03g1642 338 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 248 IPR044810 GO:0003700
Acco03g1642 338 MobiDBLite consensus disorder prediction 109 137 - -
Acco03g1642 338 MobiDBLite consensus disorder prediction 66 155 - -
Acco03g1642 338 Pfam WRKY DNA -binding domain 166 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco03g1642 338 Gene3D WRKY domain 148 226 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1642 Acco-ChrAcco03 39965075 39967178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1642 28 336 WRKY Transcription Factor Family AT4G18170 47.352 9.32e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco03g1642 WRKY 1e-25 CL0274