Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1641 ATGGAAAATGAGCCTCTGCTCGCATATTACAGTCCCACAAAGCGCCATCCACCTTCTAATCTCAGTCCTCTGGCGGAGATCAACGAAGTGGTCCTTCCTCTGAACCCATCGGAGATCAAAGACCGCCTTATCTTCGGCCCCTCCACTAGAGATTCCGCCACTTTAGTTGAAGCACTCACGTCTTCGCTTAATTCCCCAAGACAAGATTCTTCTACACACGACCTTTCACGTACTCTGGTCGAATCACAATCTCAATTACCCCGACAATTATGCTCCAAACCTTTTGTTCGTCGCTGTCAAACGGCACCAGCTATGTCTGTGATTCACGAATTTAAACATCATCCCTCTGAGCCTAATCCTCATCGTCGTAGCTCAAATTTAATTGTTTCTCAAGCGGTTATTCTTCTTGTTGTCTATCTATCATTGGGTGTGGCTATATACTTTTTCAATCGTCATGGTTTTACTGGGATTGAGACTAACCCGATCGTGGATGCCCTTTATTATTGTGTAGTGACAATGTGCACGATAGGATATGGTGACATTACTCCAAATAGTGCAGCGACCAAGCTTTTTTCTATTTTGTTTGTGTTGGTGGGATTCGGGTTTATTGACATATTGCTAAGTGGGATGGTGAATCATGTTCTTGACTTGCAAGAGAGCCACTTGCTGAAGACAATGAAGGGTAGGGATGAGAATGGCACGAGGTCTTATGTAATTGATAAGAAGAAAGGGAGAATGAGAATTAGGATGAAGGTGGCCTTGGCGTTGTTGGTTGTGGTGCTCTGTACTGGGGTTGGTGTTTGCGTGTTGCATTATGTGGAGAAGCTTGGTTGGATGGATTCTTTCTATCTTTCTGTGATGTCAGTTACGACTGTTGGATATGGTGATCGGGCATTCGAGTCGTTTGCTGGTCGTATCTTTGCTGCAATTTGGTTGCTTTTATCGACTCTTGCAGTTGCTAGGGCTTTTCTTTATTTAGCTGAGGCAAGAGTGGATAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCATGATATGACTGTTTCTGAGTTTCTTGCTGCAGACTTGGACCATAATTTCTGTGTGAGTAAATCAGAATTTGTTATATACAAGCTCAAGGAGATGGGAAAACTATCAGATAAAGACATCTTGCTGATCGGCGAGAAGTTTGACCGGCTTGATACAGAGAAACGTGGGACAATAAGGCTAGTCAATCTCATGGAGGCTAATCATGGATAA 1242 0.434 MENEPLLAYYSPTKRHPPSNLSPLAEINEVVLPLNPSEIKDRLIFGPSTRDSATLVEALTSSLNSPRQDSSTHDLSRTLVESQSQLPRQLCSKPFVRRCQTAPAMSVIHEFKHHPSEPNPHRRSSNLIVSQAVILLVVYLSLGVAIYFFNRHGFTGIETNPIVDALYYCVVTMCTIGYGDITPNSAATKLFSILFVLVGFGFIDILLSGMVNHVLDLQESHLLKTMKGRDENGTRSYVIDKKKGRMRIRMKVALALLVVVLCTGVGVCVLHYVEKLGWMDSFYLSVMSVTTVGYGDRAFESFAGRIFAAIWLLLSTLAVARAFLYLAEARVDKRNRRMAKWILGHDMTVSEFLAADLDHNFCVSKSEFVIYKLKEMGKLSDKDILLIGEKFDRLDTEKRGTIRLVNLMEANHG 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1641 413 Gene3D - 236 335 - -
Acco03g1641 413 Gene3D - 126 227 - -
Acco03g1641 413 PRINTS Two pore domain K+ channel signature 290 299 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco03g1641 413 PRINTS Two pore domain K+ channel signature 171 199 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco03g1641 413 FunFam Two-pore potassium channel 3 235 349 - -
Acco03g1641 413 Pfam Ion channel 134 211 IPR013099 -
Acco03g1641 413 Pfam Ion channel 256 327 IPR013099 -
Acco03g1641 413 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 162 384 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco03g1641 413 SUPERFAMILY Voltage-gated potassium channels 241 349 - -
Acco03g1641 413 SUPERFAMILY Voltage-gated potassium channels 122 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1641 Acco-ChrAcco03 39936999 39939915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1641 3 413 Ion Channels AT4G18160 58.005 8.03e-167 473