Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1620 ATGGCACTCGTTGAGTTTTCATCATCAAACTCTTCTGAACTGCGGTATGATCACATGTCAATGGGAATGACGACGACAATATCTCATGAGTTTCCATCATCAGACTCTTTTGATCCTAACATTGTTTATGTCGTTTCTCCAATACGTCAATGGAACCCACATCATCCCTCCAATTTCAATACCAAGAAGAGAAATACATGGACTGAGGAAGAACATAGGCTATTTCTAATTGGATTGGAAAGTTATAGGAAGGGAGATTGGAAGAACATTTCCGAAAATGTTGTGAAGACAAGGACACCAAAACAGGTTGCGAGCCATGCTGAAAAGTTCTTTAAACGCCAAATTAATAAAGAGAACAAGAAGAGAAGAAAAAGCATCCATGATATCACTGATCCTTATTCCTTCACAGAGTCCCAGCATCGAAACTAG 429 0.3916 MALVEFSSSNSSELRYDHMSMGMTTTISHEFPSSDSFDPNIVYVVSPIRQWNPHHPSNFNTKKRNTWTEEEHRLFLIGLESYRKGDWKNISENVVKTRTPKQVASHAEKFFKRQINKENKKRRKSIHDITDPYSFTESQHRN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1620 142 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Acco03g1620 142 SUPERFAMILY Homeodomain-like 61 114 IPR009057 -
Acco03g1620 142 Gene3D - 65 116 - -
Acco03g1620 142 ProSiteProfiles Myb-like domain profile. 59 111 IPR001005 -
Acco03g1620 142 MobiDBLite consensus disorder prediction 116 130 - -
Acco03g1620 142 CDD SANT 66 111 IPR001005 -
Acco03g1620 142 MobiDBLite consensus disorder prediction 116 142 - -
Acco03g1620 142 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Acco03g1620 142 ProSiteProfiles SANT domain profile. 62 115 IPR017884 -
Acco03g1620 142 FunFam transcription factor MYB1R1 65 116 - -
Acco03g1620 142 PANTHER TRANSCRIPTION FACTOR KUA1 19 132 - -
Acco03g1620 142 NCBIfam myb-like DNA-binding domain, SHAQKYF class 62 114 IPR006447 GO:0003677
Acco03g1620 142 SMART sant 63 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1620 Acco-ChrAcco03 39331024 39331550 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco03g1620 Myb_DNA-binding 3e-10 CL0123