Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1618 ATGCATGGCAATAGATCTATGCCTCATTTGTTAATTAGTGATTCATTCATGCTTGCTCGTTCTGCTTTCTTGACTATGGGAATGGTTGGTCATATAGCTCACAGAATGAAAAGGCCCAGAAATTCTCATGGCCATAATAGGTGCGTTGTGTCTCATCTTCCTCCGGCATCACTAGTTTCATCTTCGGATTTATCGCCTTCCTTTGTGTGGACTGAGATGGCTGGAGGCGTTATTCAGCAATTATTGAGAAGAAAACTTCAGTCCCAACACACTAGTCCATCCCTTTTGTCATCCATCTTCACAAGAAAAGATGATGCTGGCTCTACTGGCAGCAGGTCCTTGAGAGCACTTGCATTAATTGGAGCCAGTGTCTCAGGGTTTTTGAGTTTTGCTACTACAGCTTCAGCTGATGAGGCTGAGCATGGCCTTGAATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCATGCCATTCTATGTCTTTGGTATCATACCGTGATTTGGTTGGTGTTGCTTATACAGAAGACGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTTGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACCCGCCCTGGTAAACTCAGTGATTGCTTTCCTCAGCCATATTCAAATGAAGCAGCAGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTTAGTCTTATTACCAAAGCCCGCCACAATGGTCAAAACTATGTATTTGCCCTTCTTACTGGTTATCATGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTGCACTATAATCCATATTTTCCTGGTGGAGCAATTGCCATGCCTAAGATGCTGAATGATGGTGCTGTTGAATATGAAGATGGCACCCCTGCTACAGAATCTCAGATGGGAAAAGACGTCGTGACATTCTTGACTTGGGCCGCTGAACCTGAGATGGAAGAGAGAAAACTGATGGGGTTCAAATGGATTTTTGTACTATCGCTGGCTCTTCTTCAAGCTGCCTATTTCCGTCGATTGAGATGGTCCGTTCTCAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 1140 0.4482 MHGNRSMPHLLISDSFMLARSAFLTMGMVGHIAHRMKRPRNSHGHNRCVVSHLPPASLVSSSDLSPSFVWTEMAGGVIQQLLRRKLQSQHTSPSLLSSIFTRKDDAGSTGSRSLRALALIGASVSGFLSFATTASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEDEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDCFPQPYSNEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYHDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVTFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVLDVVN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1618 379 PRINTS Cytochrome C1 signature 213 233 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 315 334 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 148 167 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 168 187 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 334 349 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 246 270 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 284 295 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 PRINTS Cytochrome C1 signature 295 314 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 FunFam Cytochrome c1, heme protein, mitochondrial 335 379 - -
Acco03g1618 379 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 334 378 IPR021157 -
Acco03g1618 379 Pfam Cytochrome C1 family 150 366 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 FunFam Cytochrome c1, heme protein 139 334 - -
Acco03g1618 379 Gene3D - 139 334 IPR036909 GO:0009055|GO:0020037
Acco03g1618 379 PANTHER CYTOCHROME C1 105 377 IPR002326 GO:0009055|GO:0020037
Acco03g1618 379 SUPERFAMILY Cytochrome c 143 333 IPR036909 GO:0009055|GO:0020037
Acco03g1618 379 Gene3D - 335 378 - -
Acco03g1618 379 ProSiteProfiles Cytochrome c family profile. 162 269 IPR009056 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1618 Acco-ChrAcco03 39225118 39232039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1618 73 379 Chloroplast and Mitochondria Gene Families AT3G27240 83.495 2.58e-178 496