Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1617 ATGAGACATTTGTTCCTCAGTCTTCTGGTTCTTTCGTGGATTTTGTCTATCCCAAGTACCCATGAACTACAAGTTGCCCAGACTCAAGTCTTGTTACAGATGAGGATCTATTTAGAGTACCCTGCTTCGCTGCAAAGTTGGGGAAATTATTATGGTGACCTCTGTAACATTTCTTCTTCTACACATATGAGCATTAAATGTCAAGATAACTCTGTGTCTGAGCTTAAAATTAGGGGAGGCAAAAGTTTGAAATCTGATGAGTTCAATGGATTTGCAATTCCCAGTCAAACGCTGTCGATGAACTTCTCTATTGATTCTTTTATCACTGCCTTAACGAGGTTGACTAGCTTAAGGGTTCTTAGCTTGGTGTCCTTGGGAATTTGGGGTCCTCTTCCTGATAAGGTTCATCGATTATCTCAACTCGAAGTTCTGGACTTAAGCTCAAATTTCTTATTCGGTTCAATTCCACAGAAAATCTCCACTATGGTAAAGCTCAATACACTGAAACTCGATGACAATTATTTCAACGACACAATGCCAGACTGGTTTGATTCATTGTCTAATTTAGATGTCTTGAGTTTGAAAACGAACACCTTGCGGGGTTCATTCCCCTCGTCATTGTGCAACATCAAGACCCTCACCTATATTTCTGTGTCTGGCAATGAGCTATCTGGTAAATTACCTGATTTGAGCGCTCTCACCAGCCTACATGTATTGAATTTGAGAGAAAACCGTTTAGGTTCTGAACTACCATTGATGCCCTCAGGAGTGGTCACAGTTCTGCTAAGCAATAACTCATTTTCTGGGGTGATACCGAAGCAGTTCGGTGAATTGCGTGGGCTTCAACATCTAGATTTGTCTGCAAATCATCTGAGTGGAATGCCTCCACCTTCCTTGTTCTCATTGCCAAGCATCAGTTATTTGAATTTAGGTAGCAATCTGCTTAGAGGGTCACTTCCAGATCAAATAAGTTGTGGCAGCAAACTTGGTTTTGTGGATATTTCTAGTAACAAATTAATTGGTGGACTTCCTTCTTGCTTGGCCAACACGTCTGATAAAAGAGTTGTCAAATATGATGGAAATTGTTTAACTCTCAATTCTCAAGATCAGCAGCCAGGGTCTTATTGTGAAGAATCCAATAAATCCATGGCCAGGAAAAAAACTGTAGCAGGGGCCATTGTTATTGGACTTGTTCTCGTCGTTGGGATTTCGGTATCAGGAGTTTTCTCTTGTATAAAATGTCTGAGGAGAAAGAGAACTAAGCATCATTTGTTGCCAACGACTGTGCAAGATAATTCCACTACAGGGTTTTCATGTCAACTCCTCGCAAATGCCAGGTTCATTTCTCAGGCTGTGAAGCTAGGGGCACAAACTACATCAATCTGTCGACCAATTTCAGTTGAAGAGTTGAAGGATGCCACAAGAAACTTTGACTTGTCAGCATTCATCGGTGAAGGCTCCTTAGGAAAGCTGTACAAAGGTAAACTAGAGAATGGATCCTACGCGGCAATACGATCTTTAGCTCTGTCAAAGAAATGCTCAATTCAAAATCTTAAAGCTCGGTTGGACTTACTCTCAAAGCTTCAGCATCCAAATTTGGTCAGCCTCTTGGGTTACTGTATTGATAGTACTGAACAAGATAATCCAACCGCCAATAAGCTTCATCTTGTATATGAGTATGTGCCTAACGGGAGTTACCATGCCTATCTGTCAGAGTTTTCTCTAGAGAAGCCACTCAAGTGGTCTGATAGATTGGCCATTTTAATTGGGATTGCCAAGGCTGTGCACTTTTTACATACTGGGGTTATTCCAGGTTGTTTCAACAACCAATTGAAGGCAGACAATATTTTGCTTGATGAGCATCGCTTTCCCAAATTAAGCGACTATGGAATGTCCATCCTCGGAGAAGAGATTGAAAGGTTTGAGGCAAACAGACATGACACCAAACCAGGCCAAGGGGAATCATTTGAGGATGATGTTTATAACTTTGGATTCATATTGCTTGAATCACTTGTTGGATCCATAGCAAGCGGACAAGGGGAAACGTTTTTTCTGAATGAGAAGGCATCCTTTGGAAGCCAAGATGGTAGAAGAAAAATTGTGGACCCCATAGTGTTGACATCTAGCTCTCAAGAGTCATTATCGATCGCAATAGCTATAACAACCAAATGCATATCACCAGAACTTTCCTCTCGCCCCTCATTTGAGGATGTCTTGTGGAACTTACAGTATGCAGCTCAAGTGCAGGCCACAACAGATGCTGACCATAAATCAGAGTCTACATCAGAATCTCAAGATTATAAGAGGGACAAAACGTGGGATTCAACTGGTCCACATCTTTCTTCAACAAAGCAGATTATTAAACGGTCAAACTTCTGCGAGTTCTAA 2388 0.4129 MRHLFLSLLVLSWILSIPSTHELQVAQTQVLLQMRIYLEYPASLQSWGNYYGDLCNISSSTHMSIKCQDNSVSELKIRGGKSLKSDEFNGFAIPSQTLSMNFSIDSFITALTRLTSLRVLSLVSLGIWGPLPDKVHRLSQLEVLDLSSNFLFGSIPQKISTMVKLNTLKLDDNYFNDTMPDWFDSLSNLDVLSLKTNTLRGSFPSSLCNIKTLTYISVSGNELSGKLPDLSALTSLHVLNLRENRLGSELPLMPSGVVTVLLSNNSFSGVIPKQFGELRGLQHLDLSANHLSGMPPPSLFSLPSISYLNLGSNLLRGSLPDQISCGSKLGFVDISSNKLIGGLPSCLANTSDKRVVKYDGNCLTLNSQDQQPGSYCEESNKSMARKKTVAGAIVIGLVLVVGISVSGVFSCIKCLRRKRTKHHLLPTTVQDNSTTGFSCQLLANARFISQAVKLGAQTTSICRPISVEELKDATRNFDLSAFIGEGSLGKLYKGKLENGSYAAIRSLALSKKCSIQNLKARLDLLSKLQHPNLVSLLGYCIDSTEQDNPTANKLHLVYEYVPNGSYHAYLSEFSLEKPLKWSDRLAILIGIAKAVHFLHTGVIPGCFNNQLKADNILLDEHRFPKLSDYGMSILGEEIERFEANRHDTKPGQGESFEDDVYNFGFILLESLVGSIASGQGETFFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIAIAITTKCISPELSSRPSFEDVLWNLQYAAQVQATTDADHKSESTSESQDYKRDKTWDSTGPHLSSTKQIIKRSNFCEF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1617 795 Gene3D Phosphorylase Kinase; domain 1 442 560 - -
Acco03g1617 795 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 24 352 - -
Acco03g1617 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 24 255 - -
Acco03g1617 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 761 - -
Acco03g1617 795 Gene3D Transferase(Phosphotransferase) domain 1 561 771 - -
Acco03g1617 795 ProSiteProfiles Protein kinase domain profile. 477 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco03g1617 795 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Acco03g1617 795 Pfam Leucine rich repeat 258 315 IPR001611 GO:0005515
Acco03g1617 795 Pfam Protein tyrosine and serine/threonine kinase 480 670 IPR001245 GO:0004672|GO:0006468
Acco03g1617 795 Gene3D Ribonuclease Inhibitor 256 388 IPR032675 -
Acco03g1617 795 MobiDBLite consensus disorder prediction 751 780 - -
Acco03g1617 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 257 381 - -
Acco03g1617 795 SUPERFAMILY Protein kinase-like (PK-like) 459 742 IPR011009 -
Acco03g1617 795 Gene3D Ribonuclease Inhibitor 24 255 IPR032675 -
Acco03g1617 795 SUPERFAMILY L domain-like 97 364 - -
Acco03g1617 795 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 440 560 - -
Acco03g1617 795 SMART LRR_typ_2 302 326 IPR003591 -
Acco03g1617 795 SMART LRR_typ_2 278 301 IPR003591 -
Acco03g1617 795 SMART LRR_typ_2 138 162 IPR003591 -
Acco03g1617 795 SMART LRR_typ_2 233 256 IPR003591 -
Acco03g1617 795 MobiDBLite consensus disorder prediction 756 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1617 Acco-ChrAcco03 39218897 39222599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1617 6 690 Miscellaneous Gene Families AT5G14210 56.000 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Acco03g1617 PK_Tyr_Ser-Thr 5e-19 CL0016