Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1579 ATGGCTGAACTTGTGGGTGGTTCTCTTCTCTCTGCATTTCTTCAGGTTATGTTCGATCGGATTGCCTCTCCGAACGTTGTGGCCTTCTTGCGCGGGAAAAAATCTACTGAAAAATCACTCCAACGGTTGAAGACAACGTTTTATGCTGCTGGTGCCGTGCTCCATGATGCTGATCGAAAGCAAATCACTGATTCAGCTGTGAAGTCTTGGCTGGATGATCTCAGAGATGCGATTTATCGCGCCGATGACTTGATAGACGAGATTTCCACTCAAGCTGAAACTCGAGTTGAGGTACAAAATTGCTTTTATCGCTCTTTTAACTTAAATACTCGAAAGATGAATTTCAAGATCGATGACGTAGTTGACAGACTCGAATCGATTTTGAAGCACAAAGATATTCTTGGTCTGAAAGATGTTGTGGGAAGAGAGACCTTGTCATGGAGGCATCAGTCAACATCCCTCGTGGATGAATCTGATGTGTTTGGGAGAGAAAATGAAAAAGAGGCCATACTTGAGTTGTTGCTTTCTGATGACATAGATAATAATAAGATATCTGTCATTCCCATCGTGGGTATGGGTGGGATTGGGAAAACTACTTTAGCCCAAGTAGCATATAATAATGATCAAGTTAAGCAGAAATTTGATCTTAGAGCCTGGGTTTGTGTTTCTGAAGAATTTGATGTCTCTGAGATCACAAAGAGTATAGTAGAGTCTATCACTTCTCATGCTTGTGGAATGAAAGAGTTAAATTTACTTCAACTTGATCTCAAGGATAAGTTATCTGGGAAGAAATTCTTAATTGTTTTAGATGATGTTTGGAATGAGAGTTATGTTGATTGGGATCTTTTCAGAAGGCCTTTTGAATCTGGGACCAGAGGGAGTAAAATCCTCATCACAACGCGTAGTGAAAAGGTTGCTTCAGTTGTCCGAACTCTTTCACCCTATTGTGTAGGTAACTTATCTGATTATGATTGTTGGTTGATATTTGCCAAACATGCATGTCTCTATGTAGATTCTGTGGTGGATTCAAATATAGAAAGCCTTGGTAGGGATATTGTCAAAAAATGTAAGGGTCTCCCTTTAGTTGCCAAAACTCTGGGAGGCCTTTTGCGCTTCAGACGTGATATCAAGGATTGGAATATAGTATTAAAGAGTGAAATGTGGGACTTGTCAGAGGAGGAGAGTGAAATTCTTCCAGCTTTAAGAATTAGTTATCATTATCTCTCTCCGCAATTAAAACAATGCTTTCTCTATTGTTCCATGTTTCCTAAAGATTATGAATTTGAGAAAGAGGAATTAATCTTGTGGTGGATGGCTGAAGGTTTCTTAGAGCCATTAATGAAAGGGAGGACTTTAGAAGAAGTGGGGGAAGAGTATTTGTATGATTTAGTTTCAAGATCGTTTTTTCAGCCCTTGGTCAAGGATAAGCATAATAGAATTTTTGTTATGCATGACCTTATCCATGACCTAGCAACATTTGAAGCAAGAAAATTCTCCTGCTACAGCTGCAGGTCTGGCAAGGGAAATGAAATTACAAGCATGACACGTCATATGTTTTGTGAAGATGGAGACTTTAGCTCTACAAGCAAAGCGAAATCTTTGCGGACAATTCTTGTGAGGAAAGAGTGTGGCGGGTTTATGCCATCAAACAGATTTTCTAAGCTCAAGTGCTTACGTGTATTATCACTTTACAATGTCTTATCTGGGGCACTGCCAGGTTCAATAAACAAATTGATCCATTTGCGCTATTTAAATCTCTCTCGCACTAGTATCAAAAAGTTACCTGACACTTTATGCCTCTTGTACAATTTACAAACTCTGATAATTACATATTGTGATGATCTGACCAAACTGCCCAATGACATGAAGAAGCTTGTGAGCTTGCGGTACCTTGATGCTTCCCATTCTGGATTACAAGTGATGCCGAGAGGAATTGGTGAATTGAAAAAATTGCACTTTTTGAGTGACTTTGTTTTGGACAGAGTTGAAGGGGCTAGTATTATGGAATTGGGTGGACTTCAAAATCTCAGCTCATCTTTGAAAATCAAGAACTTGCAGCATGTTGCCAATGGTGGTGAAGCCTCAATGGCAAGATTGTTAGATAAGCAGTCAGTTGAAATTTTATCTCTGACATGGAATGATGCTGGTGATATCATCAATTCAAGAGACATACTCGACAATCTGCAGCCTCATGTGGACCTGAAATGTCTCCATATTTATGGATATAAAGCAACTTCATTCTCAAATTGGTTAGGATGCCCATTGTCCTGCAAAATGGTTCAACTGATTCTTTGTGATTGCTTCAATTGCAACCTGCTGCCACCACTTGGGCAACTACCTTCTCTTCGGATGCTACAGATTGAAGGGTTTGAAGCATTGGTGAAGATCGGTCCTGAGTTCTACAAGAGAAATGATGATACTTCTTTGGCACCATCCTTTCCATCACTTAAAATTCTGCGAATTGGAAACATGCCTGTCATGCAGGAATGGGGGAGCTCATGTCCCATAAATGCTTTTCCTCAACTAGAACTTCTCGCATTGAAGGATTGTCCTAGATTAAGTGATAATTTGCCTAGTCATCTTCCTGATTTGGTAACACTTCGCATCGATGGATGTGATCAGTTGGCATCTTCCATCCCAAGGGCTCGATCTATATATGCCAGCGGTTGTAAAAAATTGGATTTTTTTGGGGAACATTATTTTGAACTTGCAGAGTCCATCATTATATCTAGTAGCTGTGAGACACTTTCTCGCTTGTCATTATATAATTTTCCTAATCTGCAACAACTCATAATGACTGGCTGTAAGAATCTCAAATCTGTTGTGAATACAAAGGTAGCTTGTCAGCATCTCAAGCATATTAAGCTAATTGATTGCCCCAATCTTGAATCTTTCCCACTAGAGGGTTTGTTGGCACCCAACATGACTCATTTGGAGCTAGCAGGATGCTGCAACTTGAAGTCATTGCTTGATCTCAGGATGAATCTTCCAATGTTACAACATATATCACTAAGGGGTTGCCCAGGCATCGAGTGTGTACCTGGGAGGAGTTTGCCAACTAATTTGATGTCACTTTACATCGACCATTGTGCTTTTTCAGGCCTATGCTGTTCTGTGGAGTGGCAGACTTTAAGCAGTCTCACTACTCTTTCAATAAATGGTAAATATGATGATAGTATACAGGTTTTCCCAGCAGAGCGTTTGTTGCCTTCCTCTCTTTCAATTCTGTCCATTAGCAATTATCCAAGTCTGGAAACATTGGACTGCAGGGGATTTGTGAGCCTAAAATGTCTTCATGAATTAAGAATCAGACAATGCCCCAAGCTACAACGAATAACAGGACAAAAGCTGCCTGCCTCTCTCACACATCTCAACATCTATCAGTGTCCTTTGTTTGGAGAACTGTGCCATGCAAAGAATGGGGAAATTTGGTCCAAAGTTTCTCACATCCCCAACATTTCCTGTGACAATAATCGGGTTTTGTGA 3486 0.4016 MAELVGGSLLSAFLQVMFDRIASPNVVAFLRGKKSTEKSLQRLKTTFYAAGAVLHDADRKQITDSAVKSWLDDLRDAIYRADDLIDEISTQAETRVEVQNCFYRSFNLNTRKMNFKIDDVVDRLESILKHKDILGLKDVVGRETLSWRHQSTSLVDESDVFGRENEKEAILELLLSDDIDNNKISVIPIVGMGGIGKTTLAQVAYNNDQVKQKFDLRAWVCVSEEFDVSEITKSIVESITSHACGMKELNLLQLDLKDKLSGKKFLIVLDDVWNESYVDWDLFRRPFESGTRGSKILITTRSEKVASVVRTLSPYCVGNLSDYDCWLIFAKHACLYVDSVVDSNIESLGRDIVKKCKGLPLVAKTLGGLLRFRRDIKDWNIVLKSEMWDLSEEESEILPALRISYHYLSPQLKQCFLYCSMFPKDYEFEKEELILWWMAEGFLEPLMKGRTLEEVGEEYLYDLVSRSFFQPLVKDKHNRIFVMHDLIHDLATFEARKFSCYSCRSGKGNEITSMTRHMFCEDGDFSSTSKAKSLRTILVRKECGGFMPSNRFSKLKCLRVLSLYNVLSGALPGSINKLIHLRYLNLSRTSIKKLPDTLCLLYNLQTLIITYCDDLTKLPNDMKKLVSLRYLDASHSGLQVMPRGIGELKKLHFLSDFVLDRVEGASIMELGGLQNLSSSLKIKNLQHVANGGEASMARLLDKQSVEILSLTWNDAGDIINSRDILDNLQPHVDLKCLHIYGYKATSFSNWLGCPLSCKMVQLILCDCFNCNLLPPLGQLPSLRMLQIEGFEALVKIGPEFYKRNDDTSLAPSFPSLKILRIGNMPVMQEWGSSCPINAFPQLELLALKDCPRLSDNLPSHLPDLVTLRIDGCDQLASSIPRARSIYASGCKKLDFFGEHYFELAESIIISSSCETLSRLSLYNFPNLQQLIMTGCKNLKSVVNTKVACQHLKHIKLIDCPNLESFPLEGLLAPNMTHLELAGCCNLKSLLDLRMNLPMLQHISLRGCPGIECVPGRSLPTNLMSLYIDHCAFSGLCCSVEWQTLSSLTTLSINGKYDDSIQVFPAERLLPSSLSILSISNYPSLETLDCRGFVSLKCLHELRIRQCPKLQRITGQKLPASLTHLNIYQCPLFGELCHAKNGEIWSKVSHIPNISCDNNRVL 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1579 1161 PRINTS Disease resistance protein signature 356 370 - -
Acco03g1579 1161 PRINTS Disease resistance protein signature 922 938 - -
Acco03g1579 1161 PRINTS Disease resistance protein signature 259 273 - -
Acco03g1579 1161 PRINTS Disease resistance protein signature 186 201 - -
Acco03g1579 1161 FunFam Probable disease resistance protein At1g63360 405 493 - -
Acco03g1579 1161 Pfam Rx N-terminal domain 10 95 IPR041118 -
Acco03g1579 1161 Gene3D - 141 313 IPR027417 -
Acco03g1579 1161 PANTHER DISEASE RESISTANCE PROTEIN RP 54 869 IPR044974 GO:0006952
Acco03g1579 1161 SUPERFAMILY RNI-like 836 1136 - -
Acco03g1579 1161 Gene3D Ribonuclease Inhibitor 525 921 IPR032675 -
Acco03g1579 1161 FunFam Probable disease resistance protein At1g61300 144 312 - -
Acco03g1579 1161 Gene3D - 410 492 IPR036388 -
Acco03g1579 1161 SUPERFAMILY L domain-like 482 880 - -
Acco03g1579 1161 Gene3D - 319 409 IPR042197 -
Acco03g1579 1161 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Acco03g1579 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 419 IPR027417 -
Acco03g1579 1161 Gene3D Ribonuclease Inhibitor 990 1143 IPR032675 -
Acco03g1579 1161 SMART LRR_typ_2 625 648 IPR003591 -
Acco03g1579 1161 SMART LRR_typ_2 171 194 IPR003591 -
Acco03g1579 1161 SMART LRR_typ_2 578 601 IPR003591 -
Acco03g1579 1161 Gene3D - 27 133 - -
Acco03g1579 1161 ProSiteProfiles Leucine-rich repeat profile. 580 601 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1579 Acco-ChrAcco03 37191817 37195302 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1579 184 491 WRKY Transcription Factor Family AT5G45050 26.562 4.98e-11 65.5