Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1563 ATGCATTCCTCTGCAGTTCCAGAAGGATTTGCCAGTTGCCAAGCCATCGCCTTGTCAAGCTTTTTCTTCTTGTGGGGTAAGGAGCTGCATACCATGCCTCGCAAGGTGAATTATGGACTTGATTATGGTGATGATTACGATGACTATGAAGACTATGATTATGATGTTGAAATAGAAGAATATGGAGAAGAAGAGGGACCTGGGCGGCCTGAACCTGATAAAAGGCAAGGGACTAAAGGGCTTTGGAGATGCTCTATTTGCACTTACGACAATGAAGAGGGCATGAATGTATGTGACATATGTGGTGTTATGCGTCATCCTTTGGTTAACCCAGGAGCTTCTGACCATAGTAAAACAGTTGAAGGCATATGCAAAAATTCTGGAGCATCCAAATTGGCCAAGTCTCTTTTTGCAATATTGCCGAAACCAATGCCCAAAGAGGGTGTGTTATTTCTTAAGAAGGGTGATGGTTTTCTGACAGAAGATGGAAATAGCTACAAGCTTGGGGATGCCCAAGGAGAATTTTATGAATTTCACAAATCTGTTATTACTCAAGGCCATCACCATCTAAATATAGCTCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTGGTTTCTACTGGACTGCAGTTTTCCAAAAAGGGACTGAAAGGTACAGTTGCTGACAGTAGAAGTTCTTACGTTTCATCAAATATTACGCAGAATAATGAACTGAAAGTACAGTTAAATGGTGAAAGTTCAGACAGCTCATCATCTTTGGTTCAGAAGGGCAGGCAAGATAGTTTTGTGAAGAGCAAGCTTTCTAAGGATGTATCGTTTAATTGGGAAATAAGTGATAAAACATCAGGCGGCTTACCAGCATCTTCTGGTGTGGGTAAAATGAGTAAAATCAAGTTTTCTAATGATGAAGAAATTGATAGTCAATCCAGTGAAGAATTGTCGGATAGTTTGTCTGCAAGGCTGAAAGTTAGGGACAGTGGTAGTGAAATTCTTTGCTCTTCTAGCAAAGATGTCAGACCCGGAAAATCAGATAATACTATTTCTAAAGAACCTCATCCACAGATGCCTTATAAACCTGAAAATTGGATGCTCCCTCAACAAGCTGAAGATACCTTGACTCAGCTGAATCTTGCAGTAGTTGGTCATGTTGATTCTGGGAAGTCAACACTCTCAGGTAGACTCCTACACCTATCGGGACGAATTACGCAAAAAGAAATGCATAAATATGAAAAAGAGGCTAAATCACAGGGTAAGGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGAGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACCAAAAAATATCATGTTGTGGTGCTTGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTGGGTGCATATGAAGCAGGTATGGATAGTGGCAAAGGACAAACAAGGGAGCATGCACAGCTCATTAGAAGTTTTGGTGTTGACCAGGTTATTGTTGCAATAAATAAGATGGATGTTGTGGGATACTCTAAAGATCGGTTTGATTTAATTAGACAGCAATTGGGAGTGTTCCTTCGGACATGTGGTTTTAAAGATTCTTCTGTGTCATGGATTCCCTCGAGTGTCATAGAAAATCAAAATTTGGTGGCATCTCCTTCTGATGTTCGTTTCAAATCCTGGTATAAAGGACCCTATCTATTAGATGCAATTGATTCACTTCAACCTCCAACCAGAGAATTCTCAAAGCCTCTTTTAATGCCAGTATGTGATGTTATCAAATCACCTACGCTTGGACAAGTCTCTGCTTTTGGTAAATTAGAAGCTGGAGCTCTTCGTATTGGATCAAAGGTTTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCACATTGGAACGGGATTCCAGTGCCTGCTCCATTGTAAGAGCTGGAGATAATGTAGCTGTCACGTTGAATGGTGTAGATGCAAGTCATGTAAGGCCAGGAGGAGTATTATGCCATCCTGATTTTCCTGTTAAAGTTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTAGAAGGTGCAAATCCTATATTGGTAGGATCGCAGTTAGAATTCCATATACACCACGCCAAGGAGCTTGCCAGAGTTTCAAAAATAGTGTCAGTACTTGATCCGAAGACTGGGAAGGCGACCAAAAAGTCCCCTCGCTGTCTCATTGCTAAGCAAAGTGCAGTACTTGAGGTAATTTTGCAAGAGCCAGTATGTGTGCTAGAATCCTCTAGCTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCCTTGGGAAGAACAATCGCGGTTGGACTTGTGACCCGAATAATGGGAGAGCAAGAGTGA 2415 0.4157 MHSSAVPEGFASCQAIALSSFFFLWGKELHTMPRKVNYGLDYGDDYDDYEDYDYDVEIEEYGEEEGPGRPEPDKRQGTKGLWRCSICTYDNEEGMNVCDICGVMRHPLVNPGASDHSKTVEGICKNSGASKLAKSLFAILPKPMPKEGVLFLKKGDGFLTEDGNSYKLGDAQGEFYEFHKSVITQGHHHLNIAPFKFDVPSPDDVVSTGLQFSKKGLKGTVADSRSSYVSSNITQNNELKVQLNGESSDSSSSLVQKGRQDSFVKSKLSKDVSFNWEISDKTSGGLPASSGVGKMSKIKFSNDEEIDSQSSEELSDSLSARLKVRDSGSEILCSSSKDVRPGKSDNTISKEPHPQMPYKPENWMLPQQAEDTLTQLNLAVVGHVDSGKSTLSGRLLHLSGRITQKEMHKYEKEAKSQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSGKGQTREHAQLIRSFGVDQVIVAINKMDVVGYSKDRFDLIRQQLGVFLRTCGFKDSSVSWIPSSVIENQNLVASPSDVRFKSWYKGPYLLDAIDSLQPPTREFSKPLLMPVCDVIKSPTLGQVSAFGKLEAGALRIGSKVLVMPSAVLGTVRTLERDSSACSIVRAGDNVAVTLNGVDASHVRPGGVLCHPDFPVKVASHLELKVLVLEGANPILVGSQLEFHIHHAKELARVSKIVSVLDPKTGKATKKSPRCLIAKQSAVLEVILQEPVCVLESSSCKALGRVSLRALGRTIAVGLVTRIMGEQE 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1563 804 CDD HBS1_C_III 691 799 - -
Acco03g1563 804 ProSiteProfiles Zinc finger RanBP2 type profile. 78 107 IPR001876 -
Acco03g1563 804 Pfam Elongation factor Tu GTP binding domain 376 592 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 Pfam Elongation factor Tu C-terminal domain 691 799 IPR004160 -
Acco03g1563 804 CDD EF1_alpha 377 596 - -
Acco03g1563 804 SUPERFAMILY Ran binding protein zinc finger-like 79 105 IPR036443 -
Acco03g1563 804 ProSitePatterns Zinc finger RanBP2-type signature. 82 101 IPR001876 -
Acco03g1563 804 SMART zf_4 80 104 IPR001876 -
Acco03g1563 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 618 IPR027417 -
Acco03g1563 804 MobiDBLite consensus disorder prediction 333 357 - -
Acco03g1563 804 PANTHER TRANSLATION FACTOR 372 799 - -
Acco03g1563 804 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 697 799 IPR009001 -
Acco03g1563 804 Gene3D Translation factors 694 803 - -
Acco03g1563 804 FunFam Elongation factor 1 alpha-like protein 366 597 - -
Acco03g1563 804 FunFam Translation elongation factor EF-1 600 690 - -
Acco03g1563 804 Gene3D Translation factors 601 690 - -
Acco03g1563 804 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 373 604 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 FunFam elongation factor 1-alpha isoform X4 694 803 - -
Acco03g1563 804 PRINTS GTP-binding elongation factor signature 436 444 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 PRINTS GTP-binding elongation factor signature 517 526 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 PRINTS GTP-binding elongation factor signature 472 483 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 PRINTS GTP-binding elongation factor signature 377 390 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 PRINTS GTP-binding elongation factor signature 456 466 IPR000795 GO:0003924|GO:0005525
Acco03g1563 804 SUPERFAMILY Translation proteins 595 690 IPR009000 -
Acco03g1563 804 Gene3D - 364 597 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1563 Acco-ChrAcco03 36750965 36764547 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1563 191 800 Eukaryotic Initiation Factors Gene Family AT5G10630 62.029 0.0 731