Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco03g1517 ATGGCGGAGGCGTCTGCAGCAAATGGAACCCACGAGGTTGTTCTTAACCTCAACGACAAATCCAACGAAGATTCCGGCATCTCTGTCTCCGTCCCTTTCTTGCAGAAGTTGGTGGCAGAATTCGCGGGAACATACTTTCTGATATTTGCCGGCCAAGCAGCGGTGGTGGTGGACAAGGGCTACGACAACCAAGTAACACATCCTGGGATTTCAATAGTTTGGGGTCTTGTGGTTATGGTTCTTGTCTATTCAGTTGGTCACATCTCTGGTGCTCATTTCAATCCTGCTGTAACTCTTGGTTTTGCTTCCACCAATCGTTTTCCCCTCAAACAGGTACCAGCTTATGTATCAGTTCAGATTGTGGCATCGACTCTTGCGAGTGGGACTCTGAGACTTATATTTCAAGGAAGCAGAGACAACTTCGCAGGAACATTGTTGTCTGGGACGTATTTACAAGGTTTTGTGGTTGAGTTCATCATCACCTTCTACCTCATGTTTGTTATATCTGGTGTGGCCACAGATAACAGAGCGATTGGTGAGCTGGCTGGTCTTGCGGTGGGGGCTACGGTGTTGCTTAATGTCATGTTTGCTGGGCCGGTGACCGGAGCTTCCATGAGTCCAGCGAGAAGTTTAGGGCCAGCAATAGTGTGGCATGAATATAAAGGAATATGGGTATACATGACAGCGCCGGTGGCCGGAGCAGTGGCCGGGGCATGGGTGTATAACATCATAAGGTACACAGACAAGCCAATACGGGAGATCACAAAGTTTCCTTCTCTCCTCAAAGCTTCAAAACGTTGTGGTCCTTCAGTGTGA 816 0.4853 MAEASAANGTHEVVLNLNDKSNEDSGISVSVPFLQKLVAEFAGTYFLIFAGQAAVVVDKGYDNQVTHPGISIVWGLVVMVLVYSVGHISGAHFNPAVTLGFASTNRFPLKQVPAYVSVQIVASTLASGTLRLIFQGSRDNFAGTLLSGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGATVLLNVMFAGPVTGASMSPARSLGPAIVWHEYKGIWVYMTAPVAGAVAGAWVYNIIRYTDKPIREITKFPSLLKASKRCGPSV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco03g1517 271 Gene3D Glycerol uptake facilitator protein. 8 253 IPR023271 -
Acco03g1517 271 CDD MIP 35 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 224 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 156 174 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 74 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 111 130 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 187 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 Pfam Major intrinsic protein 30 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 PANTHER AQUAPORIN NIP2-1 22 255 IPR034294 -
Acco03g1517 271 NCBIfam MIP family channel protein 39 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco03g1517 271 SUPERFAMILY Aquaporin-like 30 254 IPR023271 -
Acco03g1517 271 ProSitePatterns MIP family signature. 92 100 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco03g1517 Acco-ChrAcco03 35680626 35682609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco03g1517 31 263 Major Intrinsic Protein MIP AT5G37810 57.940 3.87e-94 277